SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene17394

Length: 848 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene17394

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	transferase, transferring glycosyl groups / transferase, transferring hexosyl groups; K03849 alpha-1,3-glucosyltransferase [EC:2.4.1.-]	-	-	48%
FL-Next	sp=Probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase; Arabidopsis thaliana (Mouse-ear cress).	-	-	48%
Blast2go	dolichyl glycosyltransferase	-	-	63%

Source	ECs	Term	Type	e value	Identity
AutoFact	Transferases, Glycosyltransferases, Hexosyltransferases.	EC:2.4.1.-	-	0.0	48%

Source	KEGGs	Term	Identity
AutoFact	Fructose and mannose metabolism	00051	48%
AutoFact	N-Glycan biosynthesis	00510	48%
AutoFact	Mucin type O-Glycan biosynthesis	00512	48%
AutoFact	Various types of N-glycan biosynthesis	00513	48%
AutoFact	Other types of O-glycan biosynthesis	00514	48%
AutoFact	Biosynthesis of 12-, 14- and 16-membered macrolides	00522	48%
AutoFact	Glycosaminoglycan biosynthesis - keratan sulfate	00533	48%
AutoFact	Lipopolysaccharide biosynthesis	00540	48%
AutoFact	Peptidoglycan biosynthesis	00550	48%
AutoFact	Glycerolipid metabolism	00561	48%
AutoFact	Glycosylphosphatidylinositol(GPI)-anchor biosynthesis	00563	48%
AutoFact	Sphingolipid metabolism	00600	48%
AutoFact	Glycosphingolipid biosynthesis - lacto and neolacto series	00601	48%
AutoFact	Glycosphingolipid biosynthesis - globo series	00603	48%
AutoFact	Glycosphingolipid biosynthesis - ganglio series	00604	48%
AutoFact	Carotenoid biosynthesis	00906	48%
AutoFact	Zeatin biosynthesis	00908	48%
AutoFact	Flavonoid biosynthesis	00941	48%
AutoFact	Anthocyanin biosynthesis	00942	48%
AutoFact	Flavone and flavonol biosynthesis	00944	48%
AutoFact	Stilbenoid, diarylheptanoid and gingerol biosynthesis	00945	48%
AutoFact	Betalain biosynthesis	00965	48%
AutoFact	Biosynthesis of type II polyketide products	01057	48%
AutoFact	Metabolic pathways	01100	48%
AutoFact	Biosynthesis of secondary metabolites	01110	48%

Source	GOs	Term	Type	e value	Identity
Blast2go	membrane	GO:0016020	Cellular Component	0.0	63%
Blast2go	plastid	GO:0009536	Cellular Component	0.0	63%

Full-Lengther Next Prediction

SNPs (tot: 17)

Position	A %	C %	G %	T %	Probability
165			66	33	0.997452
276		80		20	0.995493
315		11		88	0.923564
327	90	10			0.90298
329		90		10	0.90298
330	90	10			0.90298
331	90		10		0.90298
335	85	14			0.999981
340	57	35	7		1.0
344	85			14	0.999981
347	85	14			0.999981
434		50		50	1.0
539	81		18		0.999994
554	81			18	1.0
696		80		20	0.999996
703	75	25			1.0
733	40		60		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain