SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene17359

Length: 931 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene17359

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Whole genome shotgun sequence of line PN40024, scaffold_66.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7TWK5_VITVI	-	-	54%
FL-Next	sp=Galactinol--sucrose galactosyltransferase; Oryza sativa subsp. japonica (Rice).	-	-	56%
Blast2go	protein	-	-	71%

Source	ECs	Term	Type	e value	Identity
Blast2go	Galactinol--sucrose galactosyltransferase.	EC:2.4.1.82	-	0.0	71%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Galactose metabolism	00052		0.0	71%

Source	GOs	Term	Type	e value	Identity
Blast2go	galactose metabolic process	GO:0006012	Biological Process	0.0	71%
Blast2go	galactinol-sucrose galactosyltransferase activity	GO:0047274	Molecular Function	0.0	71%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Raffinose synthase	IPR008811	-	0.0	71%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: sp_plants

Fln subject: Q5VQG4

Fln msg: Distance to subject end: 552 aas, your sequence is shorter than subject: 221 - 783

Fln protein: MAPNLQTDVDMLLGRVEQPISLLDGKLFVHELPFLLDVPPNVVVSPFSSICSSKVADRTGCFLGFDTATSESRHVASLGKLKGIKFASIFRFKVWWTTHWVGNNGSDMEIETQFLLLDTPSKAASQNLGPHPYVLLLPIIDGQFRASLQPGEDDSVDVCLESCSDKVRGSSFRSCVYVHAGADPFDLMKDAMRAVRYHLGTFRLLEEKTPPGIINKFGWCT

Protein Length: 222

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATTCTCAGTTGTATCTTTATTTTCTCGCAGAGTTGAAGAAGTTAGTTGAGTGATTGAGAGTATCGACATTTTGAAGCCTGGTCCGACTGGTAAGGTTGAATTTTTGAGACTCCGTATCATATCTGCGGGTAGCCAGGAGCCCAATTTTGTATATTTTTTTCTAACTGTTTTCCCTCGAGTTCTCAAACTACTGTTAATTGCTTAGCCCAAAGTTTTGTTCGATTTCTTGTTTGAATTCTTTCA_-_ATGGCTCCCAATTTGCAAACCGATGTAGATATGTTGTTGGGCCGCGTAGAGCAGCCCATTTCTCTGTTAGACGGGAAGCTTTTTGTTCATGAGTTGCCTTTCTTGCTTGATGTCCCTCCCAATGTCGTTGTCTCGCCCTTTTCTTCCATTTGCAGTTCCAAGGTCGCTGATCGGACTGGGTGTTTCCTGGGATTCGACACAGCGACATCCGAGAGCAGGCACGTTGCCTCGCTCGGAAAATTGAAGGGCATTAAATTTGCCAGCATTTTCCGTTTCAAGGTCTGGTGGACGACCCACTGGGTTGGCAACAATGGTTCCGACATGGAGATCGAGACGCAATTCTTGCTTCTGGATACTCCGTCGAAGGCCGCCTCCCAGAATTTAGGCCCGCACCCATATGTCCTCCTGCTTCCCATCATAGACGGCCAATTCAGAGCCTCGCTGCAACCCGGAGAAGACGACAGCGTGGACGTGTGCCTGGAGTCTTGTTCCGACAAGGTCCGGGGTTCGAGTTTCCGGAGCTGCGTATACGTGCACGCCGGGGCGGATCCTTTTGATCTCATGAAGGACGCGATGCGGGCGGTGAGGTACCATTTGGGGACCTTCAGACTTCTAGAGGAGAAGACCCCGCCAGGGATCATCAACAAGTTCGGTTGGTGCACGT

Fln Alignment:

sp_v1.1_unigene17359___MAPNLQTDVDMLLGRV-------EQPISLLDGK-LFVHELPFLLDXXXXXXXXXXXXIC--SSKVADRTGCFLGFDTATSESRHVASLGKLKGIKFASIFRFKVWWTTHWVGNNGSDMEIETQFLLLDTPSKAASQNLGPHPYVLLLPIIDGQFRASLQPGE-DDSVDVCLESCSDKVRGSSFRSCVYVHAGADPFDLMKDAMRAVRYHLGTFRLLEEKTPPGIINKFGWCT
Q5VQG4_______________MAPNLSKAKDDLIGDVVAVDGLIKPPRFTLKGKDLAVDGHPFLLDVPANIRLTPASTLVPNSDVPAAAAGSFLGFDAPAAKDRHVVPIGKLRDTRFMSIFRFKVWWTTHWVGTNGRDVENETQMMILDQ-SGTKSSPTGPRPYVLLLPIVEGPFRACLESGKAEDYVHMVLESGSSTVRGSVFRSAVYLHAGDDPFDLVKDAMRVVRAHLGTFRLMEEKTPPPIVDKFGWCT

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
233	11	88			0.923564

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain