SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene17339

Length: 688 nt

Origin of reads: Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene17339

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	PREDICTED: similar to Os09g0515500 n=1 Tax=Vitis vinifera RepID=UPI00019849B9	-	-	3.0e-40	78%
FL-Next	sp=Translation initiation factor IF-2, chloroplastic; Porphyra purpurea. Plastid; Chloroplast.	-	-	0.0	48%
Blast2go	translation initiation factor if-2	-	-	5.01734e-40	79%

Source	ECs	Term	Type	e value	Identity
Blast2go	Heterotrimeric G-protein GTPase.	EC:3.6.5.1	-	5.01734e-40	79%
Blast2go	Small monomeric GTPase.	EC:3.6.5.2	-	5.01734e-40	79%
Blast2go	Protein-synthesizing GTPase.	EC:3.6.5.3	-	5.01734e-40	79%
Blast2go	Signal-recognition-particle GTPase.	EC:3.6.5.4	-	5.01734e-40	79%

Source	GOs	Term	Type	e value	Identity
Blast2go	translational initiation	GO:0006413	Biological Process	5.01734e-40	79%
Blast2go	GTP binding	GO:0005525	Molecular Function	5.01734e-40	79%
Blast2go	translation initiation factor activity	GO:0003743	Molecular Function	5.01734e-40	79%
Blast2go	GTPase activity	GO:0003924	Molecular Function	5.01734e-40	79%
Blast2go	mitochondrion	GO:0005739	Cellular Component	5.01734e-40	79%

Full-Lengther Next Prediction

SNPs (tot: 52)

Position	A %	C %	G %	T %	Probability
41	33		66		0.997452
45		25		75	0.996473
47	75			25	0.996473
48		25		75	0.996473
50		75		25	0.996473
51	75		25		0.996473
53	75	25			0.996473
54		25	75		0.996473
55	75			25	0.996473
57			25	75	0.996473
62			75	25	0.996473
64	25			75	0.996473
65		25	75		0.996473
76		28	71		1.0
77	71		28		1.0
79		28	57	14	1.0
82		71	28		1.0
83	28		71		1.0
85	71	28			1.0
88			28	71	1.0
90	57			28	1.0
91	71		28		1.0
92	71			28	1.0
93	71	28			1.0
188			90	10	0.90298
231		11		88	1.0
232			11	88	1.0
235		88	11		1.0
236	88			11	1.0
237	88		11		1.0
239		11		88	1.0
240	88	11			1.0
241			88	11	1.0
242			88	11	1.0
243	88		11		1.0
245	88	11			1.0
246		53		46	1.0
251		11		88	1.0
288		47		52	1.0
326	45		55		1.0
330		55		45	1.0
339		52		47	1.0
340	58			41	1.0
349	50			50	1.0
356	50		50		1.0
373	25		75		1.0
380			50	50	1.0
420	53		46		1.0
439		69		30	1.0
480	50			50	1.0
488	50		50		1.0
498	50		50		1.0

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain