SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene17312

Length: 880 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene17312

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Adaptin ear-binding coat-associated protein, putative n=1 Tax=Ricinus communis RepID=B9SV30_RICCO	-	-	78%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	98%
Blast2go	abc transporter family protein	-	-	84%

Source	GOs	Term	Type	Identity
Blast2go	extracellular transport	GO:0006858	Biological Process	84%
Blast2go	endocytosis	GO:0006897	Biological Process	84%
Blast2go	ATPase activity, coupled to transmembrane movement of substances	GO:0042626	Molecular Function	84%
Blast2go	membrane	GO:0016020	Cellular Component	84%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Adaptin ear-binding coat-associated protein 1 NECAP-1	IPR012466	-	0.0	84%

Full-Lengther Next Prediction

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
559			50	50	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain