SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene17003

Length: 933 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene17003

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Lipid binding protein, putative n=1 Tax=Ricinus communis RepID=B9RZC4_RICCO	-	-	5.0e-10	37%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	83%
Blast2go	unknown [Picea sitchensis]	-	-	9.58628e-42	72%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	IPR016140	-	9.58628e-42	72%

Full-Lengther Next Prediction

SNPs (tot: 13)

Position	A %	C %	G %	T %	Probability
319			92	7	0.999532
328	7		92		0.999532
335		92	7		0.999602
408	83		5		0.999887
454			91	8	0.999807
537	3	40		55	1.0
619		9		90	0.999842
620		40		50	1.0
728	80			20	0.995493
729	66			33	0.997452
730	33			66	0.997452
731		33		66	1.0
918	25			75	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain