SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene16888

Length: 1091 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene16888

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Fructose-1,6-bisphosphatase n=4 Tax=Papilionoideae RepID=Q9XGG5_PEA	-	-	89%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	96%
Blast2go	fructose- -bisphosphatase	-	-	94%

Source	ECs	Term	Type	e value	Identity
Blast2go	Fructose-bisphosphatase.	EC:3.1.3.11	-	0.0	94%

Source	KEGGs	Term	Type	Identity
Blast2go	Glycolysis / Gluconeogenesis	00010		94%
Blast2go	Pentose phosphate pathway	00030		94%
Blast2go	Fructose and mannose metabolism	00051		94%
Blast2go	Methane metabolism	00680		94%
Blast2go	Carbon fixation in photosynthetic organisms	00710		94%
Blast2go	Biosynthesis of phenylpropanoids	01061		94%
Blast2go	Metabolic pathways	01100		94%
Blast2go	Biosynthesis of secondary metabolites	01110		94%
Blast2go	2-alkenal reductase.	EC:1.3.1.74	-	94%

Source	GOs	Term	Type	Identity
Blast2go	carbohydrate biosynthetic process	GO:0016051	Biological Process	94%
Blast2go	oxidation-reduction process	GO:0055114	Biological Process	94%
Blast2go	metal ion binding	GO:0046872	Molecular Function	94%
Blast2go	fructose 1,6-bisphosphate 1-phosphatase activity	GO:0042132	Molecular Function	94%
Blast2go	2-alkenal reductase [NAD(P)] activity	GO:0032440	Molecular Function	94%
Blast2go	cytoplasm	GO:0005737	Cellular Component	94%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase	IPR000146	-	0.0	94%
Blast2go	Fructose-1,6-bisphosphatase, active site	IPR020548	-	0.0	94%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NRG3

Fln msg: your sequence is shorter than subject: 277 - 341

Fln protein: TNIQGEEQKKLDVLSNEVFVKALVSSGRTCILVSEEDEEATFVEHSQRGKYCVVFDPLDGSSNIDCGVSIGTIFGIYLVKEGGEAALSDVLKPGKNMVAAGYCMYGSSCTLVLSSGSGVNGFTLDPSLGEFILTHPDIRIPKKGKIYSVNEGNAKNWDEPTRKYVERCKFPQDGSSPKSLRYIGSMVADVHRTLLYGGIFMYPADKKSPNGKLRVLYEVFPMSFLMEQAGGQAFTGSIRALDLVPTKIHQRSPVFLGSYDDVEEIKALYAAQEGKV*

Protein Length: 278

Fln nts: GACCAATATTCAGGGGGAAGAACAAAAGAAATTAGATGTGCTCTCCAATGAAGTATTTGTCAAGGCTCTTGTCAGCAGTGGGCGCACGTGCATTTTAGTTTCAGAAGAGGATGAGGAGGCGACCTTTGTGGAGCATTCACAGCGGGGAAAGTATTGCGTAGTCTTCGATCCACTCGACGGCTCTTCCAACATCGATTGTGGAGTGTCAATTGGGACGATATTTGGAATATACTTGGTGAAGGAAGGAGGAGAGGCGGCCCTGAGTGATGTTCTCAAACCAGGCAAGAACATGGTTGCAGCAGGTTATTGCATGTACGGGAGTTCCTGCACGCTTGTGCTGAGCAGCGGCAGTGGTGTAAATGGCTTTACACTGGACCCTTCCCTTGGGGAATTCATTTTGACTCATCCCGACATAAGGATACCAAAGAAAGGAAAAATATATTCGGTGAATGAAGGCAATGCAAAGAACTGGGATGAGCCAACCAGGAAGTATGTTGAGAGATGCAAATTTCCCCAAGATGGATCATCTCCCAAGTCTCTCAGATATATTGGAAGCATGGTAGCTGATGTGCACAGAACCTTACTCTATGGCGGTATTTTCATGTACCCTGCGGATAAGAAGAGTCCCAATGGAAAATTGCGTGTTCTGTACGAAGTGTTCCCCATGTCATTCTTAATGGAACAAGCAGGAGGTCAAGCTTTTACAGGAAGCATACGAGCACTTGATTTGGTTCCCACTAAGATTCACCAACGTTCCCCTGTCTTTCTTGGGAGTTATGATGATGTGGAGGAGATTAAGGCTCTGTACGCAGCACAGGAAGGGAAGGTTTAA___AAGTCCGTCCATGAATAGGCAATTGTATTTTCTAAGGATTGATGACTAATGTTAGAAACAAAAAATATGAATGCCCAGAAGAAAACATTATTTTTTCATTATTTTCTAAACGAAATATGTAATGTCACTGAATTCTCAGATTTGTACCATGCAGTATATGTGTACTTGTACATGCATATAGTGCGTGTCCATAACAAGTCTGTATCTTAATGGGAAAAGTTAATATTAAACCGTTTATGGTTATTTTCAACCAAAAAAA

Fln Alignment:

sp_v1.1_unigene16888___TNIQGEEQKKLDVLSNEVFVKALVSSGRTCILVSEEDEEATFVEHSQRGKYCVVFDPLDGSSNIDCGVSIGTIFGIYLVKEGGEAALSDVLKPGKNMVAAGYCMYGSSCTLVLSSGSGVNGFTLDPSLGEFILTHPDIRIPKKGKIYSVNEGNAKNWDEPTRKYVERCKFPQDGSSPKSLRYIGSMVADVHRTLLYGGIFMYPADKKSPNGKLRVLYEVFPMSFLMEQAGGQAFTGSIRALDLVPTKIHQRSPVFLGSYDDVEEIKALYAAQEGK
A9NRG3_______________TNVQGEEQKKLDVLSNEVFVKALVSSGRTCILVSEEDEEATFVEHSKRGKYCVVFDPLDGSSNIDCGVSIGTIFGIYLVKDGAEPTVGDVLKPGKNMVAAGYCMYGSSCTLVLSSGSGVNGFTLDPSLGEFILTHPDIRIPKKGKIYSVNEGNAKNWDEPTRKYVERCKFPQDGSSPKSLRYIGSMVADVHRTLLYGGIFMYPADKKSPNGKLRVLYEVFPMSFLMEQAGGQAFTGNIRALDLVPTKIHQRSPVFLGSYDDVEEIKALYAAQEGK

SNPs (tot: 9)

Position	A %	C %	G %	T %	Probability
323	16			83	0.994512
324		83		16	0.994512
325		83	16		0.994512
326			16	83	0.994512
450	85		14		0.993533
454	87			12	0.992554
457		87	12		0.992554
479		87		12	0.992554
884			69	23	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain