SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene16816

Length: 1381 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene16816

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Peroxidase 40 precursor, putative (EC:1.11.1.7); K00430 peroxidase [EC:1.11.1.7]	-	-	58%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	69%
Blast2go	peroxidase 40	-	-	72%

Source	ECs	Term	Type	e value	Identity
Blast2go	Peroxidase.	EC:1.11.1.7	-	0.0	72%

Source	KEGGs	Term	Identity
Blast2go	Phenylalanine metabolism	00360	72%
Blast2go	Methane metabolism	00680	72%
Blast2go	Phenylpropanoid biosynthesis	00940	72%
Blast2go	Biosynthesis of phenylpropanoids	01061	72%
Blast2go	Metabolic pathways	01100	72%
Blast2go	Biosynthesis of secondary metabolites	01110	72%

Source	ECs	Term	Type	e value	Identity
AutoFact	Peroxidase.	EC:1.11.1.7	-	0.0	58%

Source	KEGGs	Term	Identity
AutoFact	Phenylalanine metabolism	00360	58%
AutoFact	Methane metabolism	00680	58%
AutoFact	Phenylpropanoid biosynthesis	00940	58%
AutoFact	Biosynthesis of phenylpropanoids	01061	58%
AutoFact	Metabolic pathways	01100	58%
AutoFact	Biosynthesis of secondary metabolites	01110	58%

Source	GOs	Term	Type	Identity
Blast2go	oxidation-reduction process	GO:0055114	Biological Process	72%
Blast2go	response to oxidative stress	GO:0006979	Biological Process	72%
Blast2go	heme binding	GO:0020037	Molecular Function	72%
Blast2go	peroxidase activity	GO:0004601	Molecular Function	72%

Source	InterPros	Term	Type	Identity
Blast2go	Plant peroxidase	IPR000823	-	72%
Blast2go	Haem peroxidase, plant/fungal/bacterial	IPR002016	-	72%
Blast2go	Haem peroxidase	IPR010255	-	72%
Blast2go	Peroxidases heam-ligand binding site	IPR019793	-	72%
Blast2go	Peroxidase, active site	IPR019794	-	72%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NP92

Fln msg:

Fln protein: MDRISNMAVVLRTSFVFMLISVGASTKTCLSGSLKPDYYAWTCPEADAIVFAGVEKAVIQEARMAASLLRLHFHDCFVNGCDASVLLDDTVTFVGEKTAVPNLNSLRGFEVIDAIKQELEFACPGTVSCADILAMAAQDSVVLTGGASWEVQLGRRDSLTASKTTANNNIPAPTSNVATLNSKFQNVGLTEQDMVTLSGAHTIGKARCATFNSRLTGQPDPTLQKEFLTSLQQICFQGLASNNNTVTSLDVETPVIFDNQYYQNLPSGEGLLNSDQVLYSTGGTTRELVEFYMQNQEAFFENFKTSMIKMGNIQPLTGTNGEIRRNCRFVNSLG*

Protein Length: 336

Fln nts: ATGGGGATCCATTGTTGTATAACCAACTGAAGAATTTCTGAGAGATCTAAGATTTTGATGTGATTTCTTGAC_-_ATGGACAGGATCTCTAACATGGCAGTCGTTCTGAGAACCAGCTTTGTTTTCATGTTGATTTCTGTAGGTGCAAGCACGAAAACATGCCTTAGTGGATCATTAAAGCCTGATTACTATGCATGGACTTGTCCAGAGGCTGATGCAATTGTTTTCGCTGGAGTTGAAAAGGCTGTGATTCAGGAGGCACGCATGGCTGCCTCTCTACTTCGTCTGCATTTTCATGATTGTTTTGTTAATGGCTGTGATGCTTCTGTGCTGCTGGATGACACGGTCACTTTTGTGGGAGAGAAGACAGCAGTTCCTAACCTCAATTCTCTCCGTGGTTTTGAAGTTATAGATGCCATTAAACAAGAACTTGAATTTGCATGCCCTGGAACTGTTTCCTGTGCTGACATCCTTGCAATGGCAGCCCAGGACTCGGTCGTTCTGACAGGAGGAGCATCATGGGAAGTACAATTGGGAAGAAGAGACAGCCTAACAGCAAGCAAAACAACAGCAAATAACAACATTCCAGCCCCCACATCAAATGTTGCAACACTCAACTCCAAGTTTCAGAATGTAGGCCTCACTGAACAAGACATGGTCACACTCTCAGGAGCCCATACAATAGGAAAGGCGCGTTGTGCAACATTCAACTCTAGGCTCACGGGACAACCGGATCCCACTCTTCAGAAAGAGTTTTTGACATCGCTCCAACAAATCTGCTTTCAAGGGCTAGCCAGTAATAACAACACCGTAACTTCACTAGATGTGGAGACTCCTGTCATTTTTGACAACCAATACTATCAAAACCTGCCTTCTGGTGAAGGCCTACTGAATTCGGACCAGGTGCTCTATTCCACTGGAGGAACGACAAGGGAGTTGGTGGAATTTTACATGCAGAACCAGGAGGCATTCTTCGAGAACTTCAAAACCTCCATGATCAAAATGGGAAACATCCAACCCCTCACGGGCACAAATGGGGAGATTCGTCGCAATTGTCGATTTGTTAATTCATTAGGATGA___AGCTACACATATGGCAAGCTATATATATAATAAATTTATATATACCACTATATCTTAGAGTGTCTTAGGTAAAAATTATGTTGAAAAGATTGCATGTGTGGTGAATGTATTGCAGTGTTATGTTGTATTCATGAACGTATATTATTATGTAGCTCAAGATAGGATTGCTATGGCAAATAGCATAGTGTATCATCCGACCTGGATGTAAGGTTGAATATTGAATACATATAAAAATGTAATGGAGAGACACCATAATGTATCATCTCACTCGGATGTAAGGTTGAATATTGAATTTGTTGTTCAA

Fln Alignment:

sp_v1.1_unigene16816___MDRISNMAVVLRTSFVFMLISVGASTKTCLSGSLKPDYYAWTCPEADAIVFAGVEKAVIQEARMAASLLRLHFHDCFVNGCDASVLLDDTVTFVGEKTAVPNLNSLRGFEVIDAIKQELEFACPGTVSCADILAMAAQDSVVLTGGASWEVQLGRRDSLTASKTTANNNIPAPTSNVATLNSKFQNVGLTEQDMVTLSGAHTIGKARCATFNSRLTG-QPDPTLQKEFLTSLQQICFQGLASNNNTVTSLDVETPVIFDNQYYQNLPSGEGLLNSDQVLYSTG-GTTRELVEFYMQNQEAFFENFKTSMIKMGNIQPLTGTNGEIRRNCRFVN
A9NP92_______________MQRCSTMAAALRLFFVLALMSAWVSTRASPHGSLRHDHHLWTCPEAEAIVFAGVQRAVAREARMAASLLRLHFHDCFVNGCDASVLLDDTSTFEGEKTAAPNLNSIRGFEVIDAIKEELEAACPENVSCADILAMAARDSVVITGGPSWEVLLGRRDSLTASKAAAESSLPAPTSDIKTLISKFKDVGLTQKDLVALSGAHTIGKARCATFSARLMGVQPDSTLQTEYLTSLQKLCSKGFVINNDTLADLDLETPEAFDNHYYANLRSGEGLLKTDQLLYSNGTETTKDWVEFYIQHQPTFFSNFKKSMIKMGNIELLTGTSGEIRRNCRSIN

SNPs (tot: 8)

Position	A %	C %	G %	T %	Probability
109		33	66		0.997452
122		33		66	0.997452
176	33		66		0.997452
593		84		3	1.0
845		5		80	1.0
1150	75		25		0.996473
1172	80			20	0.995493
1356	33		66		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain