SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene16811

Length: 1538 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene16811

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Coiled-coil domain-containing protein 25 n=5 Tax=Poaceae RepID=B4G0U8_MAIZE	-	-	69%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	97%
Blast2go	protein	-	-	91%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein binding	GO:0005515	Molecular Function	0.0	91%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Domain of unknown function DUF814	IPR008532	-	0.0	91%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: C0PR02

Fln msg:

Fln protein: MVLYFKATPEAGDYTIYMGIDKFENEELIRYGIPEDIWFHVDKLSSAHVYLRMHKGQTIDNISQPVLDDCAQLVKANSIQGNKLNNIDIVYTPWSNLRKTSSMDVGQVGFHNPKLVRTIRVEKRINEIVNRLNKTKVERKPDLKAEREAINAAERAQIKAQGREKKRREELERLEKERQAEIRSYKGFMVAEKMTSNKDIASGSKSAQEVEDDFM*

Protein Length: 217

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATCTTCTCATCTCCTATATCTTGAGGGATGCTCTGCTCGTTCAACAAACGATTATCTATCGTTTCCCCATATTTCGAGGAGCGGTGAAGGCACTCCGCTTCTATTCCAGCGCTGTACCCTCAAAATTATCAGCGGGAGGAAAAAAGGCCTTTGATTCAGGCTGCTTGATTGTATCTTGTGGGCAGTTGGGCTTTCGGCAGGCAAG_-_ATGGTACTCTATTTCAAGGCCACGCCAGAGGCTGGTGATTACACCATCTACATGGGCATTGATAAGTTCGAAAATGAAGAACTCATCAGATACGGTATTCCTGAGGATATCTGGTTTCACGTGGATAAGCTATCCTCAGCACACGTTTATTTGAGAATGCACAAGGGTCAGACAATAGACAATATTAGTCAACCAGTCTTGGATGATTGTGCACAGCTAGTGAAGGCAAACTCTATTCAAGGAAACAAACTCAATAACATTGACATTGTGTACACCCCTTGGTCAAATTTAAGAAAGACTTCTTCTATGGATGTTGGGCAAGTTGGCTTCCATAACCCCAAGCTTGTTCGAACTATAAGAGTAGAGAAGCGAATCAATGAAATTGTGAATCGCTTGAACAAAACAAAAGTTGAGCGAAAACCTGATTTGAAAGCTGAACGAGAAGCTATAAATGCCGCAGAGAGAGCACAAATAAAAGCTCAAGGGAGGGAAAAGAAACGGCGCGAGGAACTCGAGCGCCTTGAGAAAGAGAGGCAAGCAGAAATAAGAAGCTATAAAGGCTTTATGGTTGCAGAAAAAATGACTTCTAACAAGGATATTGCATCTGGTAGCAAGTCCGCTCAAGAAGTCGAGGATGATTTCATGTGA___TGATGCAAGAAGGAAGACACATAAACAGTTTACATGTAGCTTTCTATTATGGTAGTCTGCACATGGTATTCTAGATATGTGTCTCCAAGTAATTAGAGATCTGATATAGTTCATATCAATTTTTGAGTGCCATCGACAGGGCATCTATAGTCGTTTCTGCTGGTTGCAATTCTTGACTGCAGTGATGCATAGTTGCAGTTTATGAATGTTCAAGAGAAACTGTTAAGGAGATCCCTAAATGTTTTCTCTTGGCAGGTTGATGAACTACAAAAATTTGCCTGGGACAATCTCCAGAGGAATATGTTCCAGAGACTTGTTTCTTTGATTCAGTGGCATTCTTTTTTCTTTGAAAGTGATTCATTAGTATGCACAAAGGTAATAGTAACTGAATGGGTAGATAAACTGTGTTATCTTGTGATATTGTCTGTGTTATAAGATCCCTTCTCAAGTTAAAGACAGGATCTTGTTTTGGTTGTTTCCGTTGCTCCCTAGGTACAAGCGCTCAAGTTATTTATTTGTTATTTGTGAATGACAAATAATTGATGTGTTTAAGATAACTGGCTCCAAAGATAATAATGTGGAGGCTAAAAATTTAACCTAATTTACGATCTTAAACACTTTTTTACTTTTGGGCTGCTTTAATTTTATTGTTGTATTCTCC

Fln Alignment:

sp_v1.1_unigene16811___MVLYFKATPEAGDYTIYMGIDKFENEELIRYGIPEDIWFHVDKLSSAHVYLRMHKGQTIDNISQPVLDDCAQLVKANSIQGNKLNNIDIVYTPWSNLRKTSSMDVGQVGFHNPKLVRTIRVEKRINEIVNRLNKTKVERKPDLKXXXXXXXXXXXXQIKAQGXXXXXXXXXXXXXXXXQAEIRSYKGFMVAEKMTSNKDIASGSKSAQEVEDDFM
C0PR02_______________MVFYFKATPEVGDYTIYMGIDKFENEELIRYGIPEDVWFHVDKLSSAHVYLRMHKGQTIDNISQPVLDDCAQLVKANSIQGNKINNIDVVYTPWSNLRKTSSMDVGQVGFHNPKLVRTIRVEKRINEIVNRLNKTKVERKPDLKAEREAINAAERAQIKAQGREKKRREELERLEKERQAEIRSYKGFMVAEKMTSNKDIASGSKSAQEIEDDFM

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
1459		25	75		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain