SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene16808

Length: 1237 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene16808

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Putative CCCH-type zinc finger protein (Fragment) n=1 Tax=Picea abies RepID=B2KZJ1_PICAB	-	-	6.0e-16	54%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	92%
Blast2go	ccch-type zinc finger protein	-	-	0.0	73%

Source	GOs	Term	Type	e value	Identity
Blast2go	zinc ion binding	GO:0008270	Molecular Function	0.0	73%
Blast2go	nucleic acid binding	GO:0003676	Molecular Function	0.0	73%

Full-Lengther Next Prediction

SNPs (tot: 10)

Position	A %	C %	G %	T %	Probability
299		80		20	1.0
394	88		11		0.923564
466	10			90	0.90298
468	90		10		0.90298
469		90	10		0.90298
470	90		10		0.90298
849			6	93	0.999364
957	94	5			0.998894
1130	33		66		1.0
1132	60		20	20	0.99255

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain