SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene16764

Length: 1147 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene16764

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Urb2 domain containing protein	-	-	4.0e-13	20%
FL-Next	tr=Putative uncharacterized protein; Ricinus communis (Castor bean).	-	-	0.0	42%
Blast2go	conserved hypothetical protein [Ricinus communis]	-	-	0.0	56%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein binding	GO:0005515	Molecular Function	0.0	56%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Nucleolar 27S pre-rRNA processing, Urb2/Npa2, C-terminal	IPR018849	-	0.0	56%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9STD4

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 66 aas, your sequence is shorter than subject: 382 - 2057

Fln protein: GMYWQLYTLYESSCSSHSLCQAH*SPLGSNGNFLLSSLWRNKSSISHEVYCISDNLSCCESTVDEKSSFSKLDSNSLKDLKAAVRSSFAMLVRKPLELHLFLALQSIERALGGVSDGHNTVSELHTGSPYGGRVGRIVAAGVECLDLALESVSGPKRLKLVAKYSSSFVAALLNILLHLQGPHVFFESGLDQCQDGDYVNPAFVILACVEILSKLASRHAVFQMNASHVAQSLAFPAVLFQHFCQFKSTQYVTPCKMSLPHQQIDCTKATMVVECGFAAESKMSVELFATCCKLLCALLRHRKRESGHCIALLGDSLRIFLFCLELVDHDKAEKLNANLWTVNEGVKCASWLRRVYEEMGQHKDTLGIYCPHILSDYVCVLS

Protein Length: 383

Fln nts: GGAATGTATTGGCAGTTATATACCTTATATGAATCAAGCTGTTCCTCGCATAGTCTATGTCAAGCTCATTAATCTCCACTTGGAAGCAATGGCAACTTTTTGCTTTCTTCCCTGTGGAGAAATAAAAGTTCAATTTCTCATGAAGTTTATTGCATCAGTGATAATCTCTCTTGCTGCGAAAGCACAGTGGATGAGAAATCATCATTTTCCAAATTGGATAGTAACAGTCTCAAGGACTTAAAAGCTGCTGTCCGAAGCTCCTTTGCAATGCTAGTTAGGAAGCCCTTAGAGTTGCATCTATTTCTGGCATTGCAGTCTATAGAGAGAGCCTTGGGAGGAGTTTCGGATGGCCACAATACTGTTTCTGAACTTCATACTGGAAGTCCATATGGTGGAAGAGTGGGCAGGATAGTTGCAGCTGGTGTGGAATGCTTAGATTTAGCCTTGGAATCAGTTTCAGGTCCAAAACGGTTGAAGTTGGTTGCAAAATACAGCTCAAGCTTTGTTGCAGCTTTACTAAATATTCTTTTACACCTCCAAGGACCACATGTTTTCTTTGAAAGTGGCTTGGATCAGTGTCAAGATGGTGATTATGTCAATCCGGCATTTGTCATTTTAGCATGTGTTGAAATATTATCAAAATTAGCATCAAGGCATGCAGTCTTTCAGATGAATGCTAGTCATGTGGCACAATCGTTGGCATTTCCAGCGGTACTTTTTCAACATTTTTGTCAGTTCAAATCCACCCAGTATGTAACACCATGCAAGATGTCTTTGCCACATCAACAAATAGATTGTACGAAAGCAACCATGGTTGTGGAATGTGGTTTTGCTGCGGAGAGTAAAATGTCAGTAGAGTTGTTTGCTACTTGTTGCAAGTTACTTTGTGCTCTTCTAAGACATCGCAAGAGGGAGAGTGGGCACTGTATTGCTCTTCTTGGAGACTCATTGCGTATCTTCCTTTTCTGCTTGGAGTTAGTAGATCATGATAAGGCAGAAAAATTGAATGCCAACCTCTGGACTGTAAATGAAGGAGTTAAATGTGCAAGCTGGCTTCGACGAGTCTATGAAGAGATGGGGCAACATAAGGATACACTTGGGATATATTGTCCTCACATTCTTTCTGATTACGTATGTGTTCTGTCTG

Fln Alignment:

sp_v1.1_unigene16764___SHEVYCISDNLSCCESTVDEKSSFSKLDSNSLKDLKAAVRSSFAMLVRKPLELHLFLALQSIERALGGVSDGHNTVSELHTGSPYXXXXXXXXXXXXECLDLALESVSGPKRLKLVAKYSSSFVAALLNILLHLQGPHVFFESGLDQCQDGDYVNPAFVILACVEILSKLASRHAVFQMNASHVAQSLAFPAVLFQHFCQFKSTQYVTPCKMSLPHQQIDCTKATMVVECGFAAESKMSVELFATCCKLLCALLRHRKRESGHCIALLGDSLRIFLFCLELVDHDKAEKLNANLWTVNEGVKCASWLRRVYEEMGQHKDTLGIYCPHILSDYVCVLS
B9STD4_______________SHEMESSSKILS--NNKGSSESSFSHT-SFFLDEFKARLRMSLKVLISKSIELHMFPAIQAIERALVGVQEGCTMIYEIKTGTADGGKVSSTVAAGIDCLDLVLEYISGGRQSSVVRGHIQKLVAALFNIIVHLQSSLVFYVRPTGSVHNGP--DPGAVILMCVEVVTRISGKRAL-QMASWHVAQSLHVPAALFQDFSQLRLSKGPPLPDLFLDNQDCD----PVMGKCSSVVDRKFSVELYAACCRLLYTTLKHQKRESEKCIAVLQNSARVLLHCLETVDNDLRVRKGYYSWGAQEGVKCACALRRIYEELRHHKDDFGQHCFKFLSDYIWVYS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain