SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene16692

Length: 897 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene16692

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Magnesium transporter n=2 Tax=Malpighiales RepID=B9HKE1_POPTR	-	-	3.0e-36	75%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	79%
Blast2go	magnesium transporter	-	-	4.71121e-36	88%

Source	GOs	Term	Type	e value	Identity
Blast2go	metal ion transport	GO:0030001	Biological Process	4.71121e-36	88%
Blast2go	transmembrane transport	GO:0055085	Biological Process	4.71121e-36	88%
Blast2go	magnesium ion transmembrane transporter activity	GO:0015095	Molecular Function	4.71121e-36	88%
Blast2go	membrane	GO:0016020	Cellular Component	4.71121e-36	88%

Full-Lengther Next Prediction

SNPs (tot: 30)

Position	A %	C %	G %	T %	Probability
209	77	22			0.999999
210	77		22		0.999999
213	77		22		0.999999
218		22		77	0.999999
219	77	22			0.999999
222			22	77	0.999999
223	77		22		0.999999
224		22		77	0.999999
226		77	22		0.999999
227	77			22	0.999999
228	77	22			0.999999
231		22	77		0.999999
232			77	22	0.999999
233		22	77		0.999999
234	22			77	0.999999
261		11		88	0.923564
350	90		10		0.90298
351	90			10	0.90298
352	90	10			0.90298
356			10	90	0.90298
357	10			90	0.90298
364	90		10		0.90298
365	90	10			0.90298
366	90			10	0.90298
369	90			10	0.90298
374		10	90		0.90298
375			90	10	0.90298
376		10		90	0.90298
377	10		90		0.90298
398			10	90	0.90298

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain