SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene16675

Length: 1561 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene16675

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	SPI2 protein n=1 Tax=Picea abies RepID=Q9SC55_PICAB	-	-	84%
FL-Next	tr=SPI2 protein; Picea abies (Norway spruce) (Picea excelsa).	-	-	84%
Blast2go	peroxidase 72	-	-	78%

Source	ECs	Term	Type	e value	Identity
Blast2go	Peroxidase.	EC:1.11.1.7	-	0.0	78%

Source	KEGGs	Term	Identity
Blast2go	Phenylalanine metabolism	00360	78%
Blast2go	Methane metabolism	00680	78%
Blast2go	Phenylpropanoid biosynthesis	00940	78%
Blast2go	Biosynthesis of phenylpropanoids	01061	78%
Blast2go	Metabolic pathways	01100	78%
Blast2go	Biosynthesis of secondary metabolites	01110	78%

Source	GOs	Term	Type	Identity
Blast2go	response to oxidative stress	GO:0006979	Biological Process	78%
Blast2go	oxidation-reduction process	GO:0055114	Biological Process	78%
Blast2go	heme binding	GO:0020037	Molecular Function	78%
Blast2go	peroxidase activity	GO:0004601	Molecular Function	78%
Blast2go	cytoplasmic membrane-bounded vesicle	GO:0016023	Cellular Component	78%

Source	InterPros	Term	Type	Identity
Blast2go	Plant peroxidase	IPR000823	-	78%
Blast2go	Haem peroxidase, plant/fungal/bacterial	IPR002016	-	78%
Blast2go	Haem peroxidase	IPR010255	-	78%
Blast2go	Peroxidases heam-ligand binding site	IPR019793	-	78%
Blast2go	Peroxidase, active site	IPR019794	-	78%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: Q9SC55

Fln msg:

Fln protein: MAATSGLRLQFRSVLITGLALMLWLQALHAQSSNGLSPNYYDKSCPEALSIIKSGVEDAVKQEARMAASLLRLHFHDCFVKGCDASLLLDDTANFTGEKTAKPNLNSVRGFGVVDKIKRALEKKCPGVVSCADLLAVAARDSVIISGGPAWEVPLGRRDSRSASKSGANYNIPAPTSTHQTLETKFKLKGLHSLDLVVLSGGHTIGLSRCTSFKARLYNNSGSGKPDPTLDTTYLKQLRIECPQNGTDDNQTVPLDPVTPFKFDVNYYKNIVASKGLLNSDEILYSTNGSKTAAYVKFYTTHTQAFFKQFALSMIKMGNLSPLTGSLGEIRKNCRKMN*

Protein Length: 340

Fln nts: ATGGGGGCGGGGAGCTGGAAAGCTTTATTTATATAAGGTTCATTTCCATACATGGGGAGAATGTAAAGTTCTAGTCTTTTGCATCGTCCGGAAACAGTAGAGGTTTGCTTTAGCTTTCACTGTA_-_ATGGCAGCGACTTCTGGCCTTAGACTGCAGTTTCGCTCTGTGCTTATCACGGGACTGGCACTGATGCTATGGCTCCAGGCATTACATGCTCAAAGCTCTAATGGTTTGAGTCCCAACTATTATGACAAATCCTGTCCCGAGGCCTTGTCTATCATTAAATCTGGTGTAGAAGATGCTGTGAAACAGGAAGCAAGAATGGCTGCTTCTTTGCTTCGTCTGCATTTTCATGACTGCTTTGTTAAGGGTTGCGATGCTTCGCTTCTGCTTGATGACACTGCCAACTTCACGGGGGAAAAGACAGCAAAACCTAACCTGAATTCGGTCAGAGGGTTTGGAGTGGTGGATAAGATCAAAAGAGCACTGGAGAAAAAATGCCCCGGAGTGGTGTCATGCGCTGATCTTCTTGCTGTAGCAGCCCGCGACTCTGTAATCATCAGTGGAGGACCTGCTTGGGAGGTTCCATTGGGCAGAAGGGACTCCAGAAGTGCAAGCAAGAGCGGTGCAAACTACAACATTCCTGCCCCCACATCAACCCATCAGACACTAGAAACCAAATTCAAACTCAAAGGCCTCCATTCACTTGACCTGGTTGTTCTATCAGGGGGTCATACAATAGGTTTATCGCGATGCACAAGCTTCAAGGCAAGGCTGTACAATAATAGTGGTAGTGGGAAACCTGACCCAACATTGGACACCACGTACTTGAAGCAGCTGAGAATCGAGTGTCCCCAAAATGGCACCGACGACAATCAAACTGTACCGTTGGATCCGGTCACTCCTTTTAAGTTCGACGTAAACTACTACAAGAACATTGTGGCCAGTAAAGGGTTGCTCAATTCAGATGAGATTCTTTATTCCACCAATGGAAGTAAAACAGCAGCTTATGTAAAATTCTACACAACCCACACCCAAGCTTTCTTCAAACAATTCGCTCTTTCAATGATAAAGATGGGCAACCTCAGTCCTCTCACCGGGTCCCTGGGAGAAATTAGGAAGAACTGTCGTAAAATGAATTGA___CCGAATTGTTTGGCCATGAATAAGTACCCGACAACAGATTAATAAATGTGATATATGTTGGGGGTATTTGGTTGGCTCTGAATGTCAGTTAATTTAAAAATTTCAACGAAAAGGCCCACCTCATTTGATCATGGATCAATTACGAGTGTGCCCACAGTGGATTTTCTCGGTGTTTCGTTTCATGATTGTTCTCCTTTTGTAACAGTAGTCGTGGAAGTATTCTAGCCGGTTATCGGTCACAAGTGTTTGAGACCCCTAGGGTACTCAACGCCCATTGGTCCAGTGTCGTTTTATTTTATAGGGTGTTTAGGAAATTCGAGGGCGTTAATGGGCGTTTGGAGTTATTAATTCGTTGTACAATCTCTATGGTTTATTCACAAATTCGCGTCAATAAAGTTTCTCGCCATTGTCAGCGTGAAC

Fln Alignment:

sp_v1.1_unigene16675___MAATSGLRLQFRSVLITGLALMLWLQALHAQSSNGLSPNYYDKSCPEALSIIKSGVEDAVKQEARMAASLLRLHFHDCFVKGCDASLLLDDTANFTGEKTAKPNLNSVRGFGVVDKIKRALEKKCPGVVSCADLLAVAARDSVIISGGPAWEVPLGRRDSRSASKSGANYNIPAPTSTHQTLETKFKLKGLHSLDL-VVLSGGHTIGLSRCTSFKARLYNNSGSGKPDPTLDTTYLKQLRIECPQNGTDDNQTVPLDPVTPFKFDVNYYKNIVASKGLLNSDEILYSTNGSKTAAYVKFYTTHTQAFFKQFALSMIKMGNLSPLTGSLGEIRKNCRKMN
Q9SC55_______________MARASGLRLQFRSVLIAGMALMIWIQALHAQSSNGLSPHYYHKSCPEALSIIKSGIEDAVKKEARIAASLLRLHFHDCFVKGCDASVLLDDTANFTGEKTAAPNKNSVRGFGVVDKIKSELEKKCPGVVSCADLLAVAARDSVVISGGPVWDVPLGRRDSRSASKNRATTNIPAPPQPIRHWKPNSNSKGSNSLGPGLVLSGGHSIGLSRCTSFKARLYNQTGNGKPDPTLDTTYLKQLRIVCPQNGTDDNQTVPLDPVTPFKFDVNYYKNIVASKGLLNSDEILYSTNGSKTAAYVKFYTTHTQAFFQQFAVSMIKMSNLSPLTGTRGEIRKNCRKMN

SNPs (tot: 8)

Position	A %	C %	G %	T %	Probability
462		30	70		1.0
688		20		80	0.995493
1475		61		38	1.0
1479			38	61	1.0
1483	53		46		1.0
1493		75		25	1.0
1510			54	45	1.0
1558		11		88	0.923564

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain