SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene16326

Length: 1098 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene16326

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	COPZ2; Zeta2-COP	-	-	5.0e-14	32%
FL-Next	tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley).	-	-	0.0	82%
Blast2go	protein	-	-	0.0	86%

Source	GOs	Term	Type	Identity
Blast2go	transport	GO:0006810	Biological Process	86%
Blast2go	cytoplasmic membrane-bounded vesicle	GO:0016023	Cellular Component	86%
Blast2go	plastid	GO:0009536	Cellular Component	86%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Longin-like	IPR011012	-	0.0	86%
Blast2go	AP complex, mu/sigma subunit	IPR022775	-	0.0	86%

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	C %	T %	Probability
999	81		18	1.0
1025	80	20		1.0
1037		16	84	1.0

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain