SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene16282

Length: 818 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene16282

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Low molecular weight heat-shock protein n=7 Tax=Pinaceae RepID=Q40935_PSEMZ	-	-	81%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	90%
Blast2go	low molecular weight heat-shock protein	-	-	87%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to stress	GO:0006950	Biological Process	0.0	87%
Blast2go	cytoplasm	GO:0005737	Cellular Component	0.0	87%

Full-Lengther Next Prediction

SNPs (tot: 16)

Position	A %	C %	G %	T %	Probability
352		83	16		1.0
704		5		94	0.999997
800	1		21	77	1.0
802	1	95	3		0.918242
803	2	4		60	1.0
804	7			92	1.0
805	14	64	3	7	1.0
806		70	5	11	0.999887
807	62		12	25	1.0
808	75		12	12	0.975346
809	71		14	14	0.984337
810	60		20	20	0.99255
811	50		25	25	0.995533
812	40	20		20	0.994159
813	33		66		0.997452
815		66	33		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain