SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene16280

Length: 1555 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene16280

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Lanatoside 15'-O-acetylesterase-like n=1 Tax=Oryza sativa Japonica Group RepID=Q5ZBI0_ORYSJ	-	-	37%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	34%
Blast2go	lanatoside 15 -o-acetylesterase-like	-	-	52%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Lipase, GDSL	IPR001087	-	0.0	52%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NWB0

Fln msg:

Fln protein: MEVSRMSCHCVFVAGLILMVFFHDYGIVDGAPIKPSACFKTIFQFGDSLSDTGNAARAFPQKYGSILLGFPYNSRNSSYGQTYFGRPSGRLSDGRLLVDFLAQSMKIAFLEPYLRRASANFSQGVDFSVAEATASNTTFMATNGISTNHPVTLQVQYGWYKNLSQAVNTASQVPGSAMAARLPSVDSMKNALYVIGPVGHNDYYYALSQGGKTIQQVTDLIVPNVVRSILDMIEGLYKNGARNFLLIGNAPGGCSPIFLTEFNGTKDSYGCLEEYNTIYHQHRMILKREVKAIRFLYTDSQIIFADYFDAYMNILAGHEKYGFKDIASACCGAAGVTYNYDPAIPCSKPGSTTCNSTDHHIYWDEINFTDAFNNLTATKFTSGQYLNPTIQLYCQL*

Protein Length: 398

Fln nts: ATGGGGGCCTGCCTTGAGACGATGCAACCTATGTGATGGAATGGTTGCAGATTAGCAATATTTTCATGATCAGGTCTCCCCAGTTGATACGTTATAAGGAGCAGAACATGCCCAAGGACATGGGCACTCATCTCATCTTATTTGCCCTAATTTTGCA_-_ATGGAAGTTTCAAGGATGTCATGCCACTGTGTGTTTGTAGCAGGCTTAATTCTGATGGTATTTTTCCATGATTATGGGATCGTGGATGGGGCTCCAATAAAGCCGAGCGCATGTTTCAAGACAATATTCCAGTTTGGAGACTCGCTGTCGGACACCGGGAACGCTGCCAGAGCTTTCCCTCAAAAATATGGATCCATATTACTGGGTTTTCCTTATAATTCAAGGAATTCATCTTATGGCCAAACATACTTTGGCAGACCTTCTGGTCGTCTATCAGATGGCAGGTTACTAGTCGATTTTCTAGCTCAATCCATGAAAATAGCATTTCTGGAGCCATATCTGAGGAGGGCATCTGCAAATTTCAGTCAGGGGGTAGACTTTTCTGTAGCCGAAGCCACTGCCAGCAATACCACCTTCATGGCTACGAATGGTATCTCCACCAACCATCCCGTCACTCTACAAGTACAATACGGGTGGTATAAGAATCTCTCCCAGGCTGTTAATACAGCCTCCCAAGTACCAGGGAGTGCCATGGCTGCGAGGCTTCCTAGCGTGGATTCAATGAAAAACGCGCTGTATGTGATCGGACCAGTCGGTCACAACGACTACTATTATGCACTTTCACAGGGTGGAAAAACAATACAACAAGTAACAGACCTCATTGTGCCCAATGTTGTTCGCTCCATTCTAGACATGATAGAGGGCCTTTACAAGAATGGAGCAAGAAACTTTCTTCTGATTGGCAACGCCCCTGGAGGTTGCTCTCCTATTTTCCTCACAGAATTCAATGGAACCAAGGACAGCTATGGATGTTTGGAAGAATACAACACGATCTACCATCAACACAGAATGATCCTTAAGAGAGAAGTGAAGGCCATTAGATTCCTTTATACAGATTCTCAGATCATCTTTGCAGACTACTTTGATGCATACATGAACATTCTCGCCGGTCATGAAAAATACGGATTCAAGGACATAGCTTCTGCATGTTGTGGTGCAGCGGGAGTGACATACAACTATGATCCAGCTATACCATGCAGCAAGCCTGGCTCCACAACTTGTAATAGCACAGACCATCACATCTACTGGGATGAGATTAATTTCACAGACGCCTTCAACAACCTTACCGCCACAAAGTTCACCTCTGGACAATATTTGAATCCCACCATTCAGCTCTACTGCCAACTCTAA___GGTTCCCTTCTTTCAGTTTGAGCAGCCCGCATATAGGAGTGTGCGGATGAAGATGGCCGTGTCTCTCTGATATGTAAACTTGGATTTTTGGAACAAATAATCTAAACAATAAACTTGCAGTATTTATGTGTTGAGCAAAGGGCAAGTTCACCATGCTAAATATGTTATATATACAACATTATTTACTTGCCAATATTTTCATACCTT

Fln Alignment:

sp_v1.1_unigene16280___CFKTIFQFGDSLSDTGNAARAFPQKYGSILLGFPYNSRNSSYGQTYFGRPSGRLSDGRLLVDFLAQSMKIAFLEPYLRRASANFSQGVDFSVAEATASNTTFMATNGIS---TNHPVTLQVQYGWYKNLSQAVNTASQVPGSAMAARLPSVDSMKNALYVIGPVGHNDYYYALSQGGKTIQQVTDLIVPNVVRSILDMIEGLYKNGARNFLLIGNAPGGCSPIFL----TEFNGTKDSYGCLEEYNTIYHQHRMILKREVKAIRFLYTDSQIIFADYFDAYMNILAGHEKYGF-KDIASACCGAAGVTYNYDPAIPCSKPGSTTCNSTDHHIYWDEINFTDAFNNLTATKFTSGQYLNPTI
A9NWB0_______________CYSAIYSFGDSLADTGNLLISGAQQFGPI--------SELPYGQTYFNKPTGRCSNGRLIVDFIAQAYGFQFLPPFLDK-HADFSNGANFAVAGATAMDASFFEERHIEPIFTNFSLDTQIE--WFKTFKE--NYCYGTPDCA--------DHFENALFLIGEIGGNDYNYPFAQ-GRSLEEVS-TFVPLIVQKIKGAIEELIDEGAKKFFVQGNLPIGCSPFYLTTQQTNSSADLDHMGCLVKFNNFSQYSNLHIRNMLLDVQGKHQNISIIYADYFSAALKVLSNPKQYGLQRNVLRVCCGRGG-KYNFSPPTSCS-PNVSSCLNPEQYFNWDGVHLTETAYRTIAKMFVDGKFTTPKI

SNPs (tot: 7)

Position	A %	C %	G %	T %	Probability
1367			95	4	0.999984
1489	8			91	1.0
1490	5	2	2	88	0.985613
1491	2	20	2	73	1.0
1507	33		66		1.0
1519	77	22			1.0
1541	62		37		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain