SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene16210

Length: 1477 nt

Origin of reads: Biogeco_1 Uagpf Uma

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene16210 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Flavonol 4'-sulfotransferase, putative n=1 Tax=Ricinus communis RepID=B9TIQ1_RICCO	-	-	40%
FL-Next	sp=Flavonol sulfotransferase-like; Arabidopsis thaliana (Mouse-ear cress).	-	-	38%
Blast2go	sulfotransferase family protein	-	-	53%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Transferring sulfur-containing groups, Sulfotransferases.	EC:2.8.2.-	-	0.0	53%

Source	KEGGs	Term	Identity
Blast2go	Tryptophan metabolism	00380	53%
Blast2go	Various types of N-glycan biosynthesis	00513	53%
Blast2go	Other types of O-glycan biosynthesis	00514	53%
Blast2go	Glycosaminoglycan biosynthesis - chondroitin sulfate	00532	53%
Blast2go	Glycosaminoglycan biosynthesis - keratan sulfate	00533	53%
Blast2go	Glycosaminoglycan biosynthesis - heparan sulfate	00534	53%
Blast2go	Polycyclic aromatic hydrocarbon degradation	00624	53%
Blast2go	Glucosinolate biosynthesis	00966	53%
Blast2go	Biosynthesis of secondary metabolites	01110	53%

Source	GOs	Term	Type	e value	Identity
Blast2go	sulfotransferase activity	GO:0008146	Molecular Function	0.0	53%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Sulfotransferase domain	IPR000863	-	0.0	53%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: sp_plants

Fln subject: P52839

Fln msg:

Fln protein: MAAVEEESTMELMNSSPTELIASNGMRTQKCEGFWINDKFLPAVKVLQREFQPLADDIFLASLPKTGTTWCKALLHTIFQFCKEDTNFGASVEDRNPHSLVPTMEAYLFDSTAEHQQYDVSIFSKFPSPRLLHTHLPFSLLPPPVRSSACKIVYIARNPRDVSVSRWKYFNKLREDGFPYLNGDLSKETLFDGFCSGFFNGGPFAESVLSYWHESRRDPNKVMFVTYEDLQADCVGCVKKLGVFLGCSPQLMEENAAIIAEKCSFQSLSTAEVNKTGIGLENKLRMPYRSLFREGKVGDWKKHFTPQMEERIYLEIEQKLNNEGLHFKYSL*

Protein Length: 333

Fln nts: CTACTCTCACTTTCTATACCTTCAACGGTCATCATTGCTCGTCGTGGAGTCCTTATCCAGTTGTGAACAGCGAATCAATGAATATATAAACGACACGACCCTCACTTTCATCACCTTCAACGGCCATCATTGCTCGTCGTGGAGTCCTTATCCAGTTGTGAACAGCGGCAGCAGCAACAGGAGGGCGAGATC_-_ATGGCGGCTGTAGAAGAAGAATCGACTATGGAATTGATGAATTCGTCGCCCACTGAACTCATTGCGTCCAACGGGATGAGGACCCAGAAGTGTGAAGGGTTTTGGATAAATGATAAGTTCCTCCCAGCAGTGAAGGTTTTGCAAAGGGAATTCCAACCGCTGGCGGACGACATTTTCTTGGCTTCATTACCAAAAACGGGGACAACATGGTGTAAAGCATTGCTTCACACCATCTTCCAATTTTGCAAAGAAGACACGAATTTCGGGGCTTCTGTAGAAGACCGAAATCCCCATTCTTTGGTACCCACCATGGAAGCTTACCTCTTCGATTCTACTGCTGAGCATCAACAGTACGACGTTTCCATCTTTTCCAAGTTTCCATCCCCGCGTCTGCTGCACACCCATTTGCCATTCAGTTTGCTGCCTCCTCCTGTCAGGTCTTCTGCTTGTAAGATCGTTTACATTGCTCGCAACCCCAGGGATGTCTCCGTTTCCCGTTGGAAATACTTCAATAAACTTCGTGAAGACGGGTTCCCTTATTTAAATGGAGATTTGAGCAAGGAAACTTTGTTTGACGGTTTTTGCTCTGGGTTTTTCAATGGCGGCCCGTTTGCTGAAAGCGTTCTGAGTTATTGGCATGAAAGCAGACGGGATCCCAATAAGGTGATGTTCGTTACTTACGAGGACCTGCAAGCCGATTGCGTGGGTTGCGTTAAAAAGCTTGGCGTTTTCTTGGGCTGCTCTCCTCAACTCATGGAGGAGAACGCTGCAATAATTGCGGAGAAGTGCAGTTTCCAGAGCCTGTCAACAGCGGAGGTGAACAAAACCGGCATAGGGTTGGAAAATAAACTTCGAATGCCCTACCGCAGTTTATTCAGAGAGGGAAAAGTGGGCGACTGGAAGAAGCATTTCACGCCACAGATGGAGGAGCGTATTTATTTAGAGATCGAGCAGAAATTGAACAACGAGGGCCTCCATTTCAAATACAGTTTATAG___AAAGCCATCACATTACTGATCCATTTCCATTCTGAGATAAGCGCTAAGTGGTGTAGAATGTTATTATATTACTGTCAACTAATTTTGTTTATCAGATAGGCGTTGTCGAGTCTGCTACAGTGGGTTCGTGAAGGTGTTTCTAATTGTTTGGGTTAGGTTTGGTGCCGTGTTTATAATTGTGTGGGTTAAGTTTTGGATATTTATGAAAATATTATGTTGTATTTGTTCTAATTGTGTGGCCTTTATGTTTGGCGACAATGAAGGTGTTTATAATTGTGTGTTTTAAGTT

Fln Alignment:

sp_v1.1_unigene16210___EGFWINDKFLPAVKVLQREFQPLADDIFLASLPKTGTTWCKALLHTIFQFCKEDTNFGAS--VEDRNPHSLVPTMEAYLFDSTAEHQQYDVSIFSKFPSPRLLHTHLPFSLLPPPVRSSACKIVYIARNPRDVSVSRWKYFNKLREDGFPYLNGDLSKETLFDGFCSGFFNGGPFAESVLSYWHESRRDPNKVMFVTYEDLQADCVGCVKKLGVFLGCSPQLMEENAAIIAEKCSFQSLSTAEVNKTG---IGLENKLRMPYRSLFREGKVGDWKKHFTPQMEERIYLEIEQKLNNEGLHF
P52839_______________QGLWHTQAILQGILICQKRFEAKDSDIILVTNPKSGTTWLKALVFALLNRHKFPVSSSGNHPLLVTNPHLLVPFLEGVYYESP----DFD---FSSLPSPRLMNTHISHLSLPESVKSSSCKIVYCCRNPKDMFVSLWHFGKKLA----PEETADYPIEKAVEAFCEGKFIGGPFWDHILEYWYASRENPNKVLFVTYEELKKQTEVEMKRIAEFLECG-FIEEEEVREIVKLCSFESLSNLEVNKEGKLPNGIETK------TFFRKGEIGGWRDTLSESLAEEIDRTIEEKFKGSGLKF

SNPs (tot: 35)

Position	A %	C %	G %	T %	Probability
416	60		40		1.0
451		90		10	0.90298
452		90	10		0.90298
453	10			90	0.90298
454	90		10		0.90298
457	10	90			0.90298
459	10		90		0.90298
461		10		90	0.90298
462		10		90	0.90298
463	10			90	0.90298
464	10			90	0.90298
466			10	90	0.90298
472			10	90	0.90298
473	10	90			0.90298
560		50	37	12	1.0
562	12	87			0.992554
565	87		12		0.992554
566		12	87		0.992554
568	12			87	0.992554
569	12			87	0.992554
570			12	87	0.992554
571			12	87	0.992554
573	87	12			0.992554
578	87		12		0.992554
1170		85		14	0.993533
1173	85			14	0.993533
1357	33		66		0.997452
1359	33	66			0.997452
1362		33		66	0.997452
1363		33	66		0.997452
1370	33	33	33		0.997753
1372			33	33	0.997753
1373	33	33		33	0.997753
1376	66	33			0.997452
1377	66	33			0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain