SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene16047

Length: 1069 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene16047

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Early response to dehydration 15-like protein (Fragment) n=3 Tax=Pseudotsuga menziesii var. menziesii RepID=Q5MED0_PSEMZ	-	-	79%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	95%
Blast2go	early response to dehydration 15-like protein	-	-	65%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Ataxin-2, C-terminal	IPR009818	-	0.0	65%

Full-Lengther Next Prediction

SNPs (tot: 6)

Position	A %	C %	G %	T %	Probability
349		16		83	0.994512
574			19	80	1.0
653			42	57	1.0
681	63			36	1.0
682	63			36	1.0
881	97		2		0.964186

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain