SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15985

Length: 1434 nt

Origin of reads: Uma

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene15985 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	triacylglycerol lipase (EC:3.1.1.3)	-	-	41%
FL-Next	sp=Triacylglycerol lipase 1; Arabidopsis thaliana (Mouse-ear cress).	-	-	40%
Blast2go	protein	-	-	61%

Source	ECs	Term	Type	e value	Identity
Blast2go	Triacylglycerol lipase.	EC:3.1.1.3	-	0.0	61%

Source	KEGGs	Term	Type	Identity
Blast2go	Glycerolipid metabolism	00561		61%
Blast2go	Metabolic pathways	01100		61%
Blast2go	Galactolipase.	EC:3.1.1.26	-	61%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Glycerolipid metabolism	00561		0.0	61%

Source	GOs	Term	Type	Identity
Blast2go	triglyceride lipase activity	GO:0004806	Molecular Function	61%
Blast2go	phospholipase activity	GO:0004620	Molecular Function	61%
Blast2go	galactolipase activity	GO:0047714	Molecular Function	61%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Partial AB-hydrolase lipase domain	IPR006693	-	0.0	61%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: sp_plants

Fln subject: Q71DJ5

Fln msg:

Fln protein: MGDGHYWRCGKFYLQLLFTRWPSCGIEMDTNTGAPDGLCSTFVEPYYSKYDCHEYSTVTPDGFRLGLQRINSRSDSGQKGPLLLNHGVLNGGDAWVLNSPDEFDVSPAFVLADAGYDVWIGNARTTRYSYGHENLTQEDEAYWDWSFDELAAFDLPSMMYLVHNVTNKKIHYIGHSQGTQSALAALSEGKLIDIVNKVALLAPVAYDTHIWTALLAGAAVLHLDQLVKMLGFNKFSTKTPKGKQYVDLICQEGNLDCDKDYVTAFTGTNCCFNYSKFPFYDQYETQSTSTKNLVHLAQLYREDKFQKYDYGAAENNQRYNSIYPPAYDLSKVPTKNLLLVYGGLDPLADLVDVQRLKNELSPGYKYLFKPNFAHLDFIVANNCKQQLYDEVMAFFEDEQNMGITF*

Protein Length: 407

Fln nts: AATAACGGCGCTTTACTGACTCTACACTAAGTT_-_ATGGGGGACGGACATTATTGGAGATGTGGAAAATTCTATTTGCAATTGCTGTTCACTCGTTGGCCTTCCTGCGGTATTGAGATGGATACTAATACGGGCGCTCCAGATGGTTTATGCTCCACATTCGTGGAGCCTTATTATTCTAAATATGATTGCCATGAGTATAGTACTGTGACCCCAGATGGATTTCGGTTGGGACTGCAGAGGATCAATTCTCGCTCCGATTCGGGGCAAAAGGGTCCTCTTCTGTTGAACCATGGAGTTCTGAACGGTGGAGATGCTTGGGTGTTGAATTCGCCTGATGAATTCGATGTATCGCCGGCATTCGTTCTGGCAGATGCGGGGTATGATGTCTGGATCGGGAATGCTCGGACTACGCGTTATAGCTATGGACATGAAAACTTGACACAAGAAGATGAGGCATACTGGGATTGGAGCTTCGATGAACTGGCAGCCTTTGACCTTCCCAGCATGATGTACCTAGTGCACAACGTTACAAACAAAAAGATCCATTACATTGGTCACTCTCAGGGAACTCAATCTGCACTGGCTGCATTAAGTGAAGGGAAATTAATAGATATTGTGAACAAGGTGGCATTATTGGCTCCAGTTGCTTATGACACTCATATCTGGACGGCCCTGCTAGCTGGGGCAGCAGTGCTGCATTTAGATCAGCTAGTTAAAATGCTCGGATTCAATAAGTTCAGCACAAAAACGCCCAAGGGAAAACAATACGTCGATCTTATATGCCAAGAAGGAAACTTGGACTGTGATAAAGACTATGTTACAGCTTTCACTGGAACAAACTGTTGCTTCAACTATTCAAAATTTCCCTTCTACGACCAATACGAGACGCAGTCGACCTCAACGAAGAATTTGGTTCATTTAGCTCAATTATATAGAGAAGACAAGTTTCAGAAATATGATTATGGGGCCGCAGAGAACAATCAGAGGTATAATTCCATCTATCCTCCGGCATATGATCTGTCCAAAGTGCCTACCAAAAACTTGCTGCTCGTCTATGGAGGCTTAGACCCTTTGGCAGATCTAGTGGATGTGCAGAGGTTGAAGAATGAGTTGAGTCCAGGATACAAATATCTGTTCAAGCCAAATTTTGCTCATTTGGATTTCATTGTCGCTAACAACTGCAAGCAACAGCTCTACGACGAAGTCATGGCCTTCTTTGAGGATGAGCAAAACATGGGCATCACCTTCTGA___AGACAGGGATGCAGTAGATTCTTTTTTTCTTCATGACACAATATACAGATGTAACGTATAGGGTTTGATCTGCTTGCAGATTATTTTATTTAATATGAAAATGATATTTTACTTGTAAGGCAATAAGTATTACCTTAACAAATAATTTTATATAGTAGTAAATATTATTCCAATCTTTTGCCC

Fln Alignment:

sp_v1.1_unigene15985___GAP-DGLCSTFVEPYYSKYDCHEYSTVTPDGFRLGLQRINSRSDSGQKGP-LLLNHGVLNGGDAWVLNSPDEFDVSPAFVLADAGYDVWIGNARTTRYSYGHENLTQEDEAYWDWSFDELAAFDLPSMMYLVHNVTNKKIHYIGHSQGTQSALAALSEGKLIDIVNKVALLAPVAYDTHIWTALLAGAAVLHLDQLVKMLGFNKFSTKTPKGKQYVDLICQEGNLDCDKDYVTAFTGTNCCFNYSKFPFYDQYETQSTSTKNLVHLAQLYREDKFQKYDYGAAENNQRYNSIYPPAYDLSKVPTK-NLLLVYGGLDPLADLVDVQRLKNELSPGYKYLFKPNFAHLDFIVANNCKQQLYDEVMAFF
Q71DJ5_______________GSPVNSLCADLIHP--ANYSCTEHSIQTKDGYILALQRVASLGPRLQSGPPVLLQHGLFMAGDVWFLNSPKE---SLGFILADHGFDVWVGNVRGTRYSYGHVTLSDTDKEFWDWSWQDLAMYDLAEMIQYLYSISNSKIFLVGHSQGTIMSFAALTQPHVAEMVEAAALLCPISYLDHVTAPLVERMVFMHLDQMVVALGLHQINFRSDMLVKLVDSLC-EGHMDC-TDFLTSITGTNCCFNASKIEYYLDYEPHPSSVKNIRHLFQMIRKGTFAQYDYGYFKNLRTYGLSKPPEFILSHIPASLPMWMGYGGTDGLADVTDVEHTLAELPSSPELLYLEDYGHIDFVLGSSAKEDVYKHMIQFF

SNPs (tot: 7)

Position	A %	C %	G %	T %	Probability
631		83		16	0.994512
650	83			16	0.994512
682			83	16	0.994512
1268	75		25		0.996473
1274	25	75			0.996473
1330		62		37	1.0
1361	12	87			0.992554

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain