SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15956

Length: 1187 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene15956

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Unassigned protein	-	-	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	77%
Blast2go	phytoalexin-deficient 4-1 protein	-	-	70%

Source	ECs	Term	Type	e value	Identity
Blast2go	Triacylglycerol lipase.	EC:3.1.1.3	-	0.0	70%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Glycerolipid metabolism	00561		0.0	70%
Blast2go	Metabolic pathways	01100		0.0	70%

Source	GOs	Term	Type	e value	Identity
Blast2go	lipid metabolic process	GO:0006629	Biological Process	0.0	70%
Blast2go	triglyceride lipase activity	GO:0004806	Molecular Function	0.0	70%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NW04

Fln msg: Unexpected stop codon in the beginning of your sequence, your sequence is shorter than subject: 327 - 616

Fln protein: VVTLAVTHEYCASNAGLLSVLHASFLLCNI*YKIFTVALYLSASYSFEFYFRHTN*SLKCC*IGDDNFVQNDHAQLALQKAGETENKYNTNVDRLAIELSLRQRTMAELEWYKESCEEEGGIGYYDTFKNQDMKDIGADTRRVKLAEFWDEIIEKWEGHELPSDFESQNKWINAGNTYRKLVEPLDIAYYYRNNSNGNYLSDGRHNRHKVLQKWMEAKEKARGSRGQRTRTKRASLTPDSCLWAHVEEAWKDLKNLKQGQHESLQKLEKFEEYVTKMENDLSISRDVFFQGSRFKMWWQEWKEYKQNQFPDWSSPLCQKMETLQVI*

Protein Length: 328

Fln nts: CGTCGTGACCTTGGCTGTCACTCATGAATACTGTGCTTCCAATGCTGGCCTTTTGAGTGTTCTGCATGCTAGTTTTTTATTGTGTAATATCTGATATAAGATTTTTACTGTAGCGTTGTATTTATCTGCCTCCTACTCTTTTGAATTTTATTTCAGGCACACTAATTGATCTTTGAAATGTTGTTGAATTGGTGATGATAACTTTGTGCAGAATGATCATGCACAGCTTGCCCTACAGAAAGCTGGAGAAACTGAAAACAAGTATAACACAAATGTTGATAGGCTAGCTATTGAGTTAAGCCTAAGACAAAGAACTATGGCAGAGCTTGAATGGTATAAAGAGAGTTGTGAGGAGGAGGGTGGCATCGGATATTATGATACCTTCAAGAACCAAGACATGAAGGATATTGGTGCTGATACGCGTAGGGTAAAGCTTGCAGAGTTTTGGGATGAGATTATTGAAAAGTGGGAAGGTCATGAGTTGCCAAGTGATTTCGAATCCCAAAATAAGTGGATAAATGCTGGCAATACCTATAGAAAACTGGTAGAGCCTCTGGATATAGCATATTATTATCGCAATAACAGCAATGGCAACTATCTTTCAGATGGAAGACACAATCGCCATAAAGTTCTTCAGAAATGGATGGAAGCGAAAGAAAAAGCTCGCGGTTCAAGAGGTCAACGAACCCGCACAAAGCGTGCATCCCTCACCCCGGACTCGTGCCTCTGGGCACATGTAGAAGAGGCTTGGAAAGACCTGAAAAATCTAAAACAAGGACAACACGAAAGCCTACAAAAGCTTGAAAAGTTTGAAGAGTATGTAACAAAGATGGAAAACGATCTCAGCATTTCTCGAGATGTTTTCTTCCAAGGAAGCAGGTTCAAGATGTGGTGGCAAGAATGGAAAGAGTATAAGCAAAACCAATTCCCTGATTGGAGCTCTCCTTTATGTCAGAAAATGGAAACGTTGCAGGTTATTTGA___ATGGAAAAGCTGTTTAGAACATGATCTTCCCCTGAATGGAGCTCTCCTTTATGTCAGATAATGGGAAAGTTGCAGGTTGTCTGAATGAAAAGCTGTTTACAACATGATCTTCCCGTTAGGTTGCTTGTAATGTTTTCGAGATTCAAGGCAGAGGGTTTTCTGCTAATTAGATTGCTTGTTTTGTATCTAAATTTCTGTCTCTACC

Fln Alignment:

sp_v1.1_unigene15956___QNDHAQLALQKAGETENKYNTNVDRLAIELSLRQRTMAELEWYKESCEEEGGIGYYDTFKNQD-MKDIGADTRRVKLAEFWDEIIEKWEGHELPSDFESQNKWINAGNTYRKLVEPLDIAYYYRNNSNGNYLSDGRHNRHKVLQKWMEAKEKARGSRGQRTRTKRASLTPDSCLWAHVEEAWKDLKNLKQGQHESLQKLEKFEEYVTKMENDLSISRDVFFQGSRFKMWWQEWKEYKQNQFPDWSSPLCQKMETLQVI
A9NW04_______________QNDHAQFALRRAGETEDNYNTNVDKLAIELSLKQSSMAELEWYKERCEKEDGITYYDSFKKQNNRKDFRANVDRKKLCQFWDEIIEKWEGHELPSDFESQNKWINAGNTYRRLVEPLDIASYYRTNGNGNYLSDGRPNRHKILQRWMEAKEKTRSSRGQRPRTKRASLTADSCFWAHVEEAWKDLENLKQGQHQSLQKLEKFEEDVTNMENALTISPDVFLEGSSFIMWWEEWKEYKKNQSPEWSSPLYKIMEKLQVI

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
733	14		85		0.993533
931	11	88			0.923564
932		88		11	0.923564
933		88	11		0.923564
934			11	88	0.923564

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain