SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15824

Length: 686 nt

Origin of reads: Biogeco_1 Biogeco_2 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene15824

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Defensin-2 n=1 Tax=Pinus sylvestris RepID=DEF2_PINSY	-	-	7.0e-36	81%
FL-Next	sp=Defensin-2; Pinus sylvestris (Scots pine).	-	-	0.0	93%
Blast2go	defensin precursor	-	-	1.2654e-35	80%

Source	GOs	Term	Type	e value	Identity
Blast2go	defense response to fungus	GO:0050832	Biological Process	1.2654e-35	80%
Blast2go	killing of cells of other organism	GO:0031640	Biological Process	1.2654e-35	80%
Blast2go	extracellular region	GO:0005576	Cellular Component	1.2654e-35	80%
Blast2go	cytoplasmic membrane-bounded vesicle	GO:0016023	Cellular Component	1.2654e-35	80%

Full-Lengther Next Prediction

SNPs (tot: 6)

Position	A %	C %	G %	T %	Probability
470	11	72			1.0
471	86			2	1.0
489	74		25		1.0
504		25	74		1.0
517		78	21		1.0
540	1	95			0.918242

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain