SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15818

Length: 1347 nt

Origin of reads: Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene15818

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Acid phosphatase 1 precursor, putative (EC:3.1.3.2)	-	-	49%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	85%
Blast2go	acid phosphatase	-	-	72%

Source	ECs	Term	Type	e value	Identity
Blast2go	Acid phosphatase.	EC:3.1.3.2	-	0.0	72%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Aminobenzoate degradation	00627		0.0	72%
Blast2go	Riboflavin metabolism	00740		0.0	72%

Source	GOs	Term	Type	Identity
Blast2go	acid phosphatase activity	GO:0003993	Molecular Function	72%
Blast2go	vacuole	GO:0005773	Cellular Component	72%
Blast2go	plasma membrane	GO:0005886	Cellular Component	72%

Source	InterPros	Term	Type	Identity
Blast2go	Acid phosphatase (Class B)	IPR005519	-	72%
Blast2go	Acid phosphatase, plant	IPR010028	-	72%
Blast2go	Vegetative storage protein/acid phosphatase	IPR014403	-	72%
Blast2go	HAD-like domain	IPR023214	-	72%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NRU7

Fln msg:

Fln protein: MASLSLNHQNLLLLLILLFSCDLHSSTANSPKISDWISKESTAREKWTLRQAPQDPQLNCDAWRFGVETNTLRFWNVVPPECVEYVKDYMVGSQYLWDSNMVANESIAYVNSLNLSGDGKDVWVFDVDETLLSNLPLYAAYNYGGAWMDDGAFIKWADLAEASALPASHRLYTHLLQLGFKIFLLTGRYDYERSATEKNLFRAGYHSWEALLLRGPDEYEMSAVLYKSERRLKIEKNGFRIRGNSGDQWSDLSGYSFGDRTFKLPNPMYFIA*

Protein Length: 274

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATCACCATGATTGGGCGCATGATTGTGTTTCGCATTGTGTACAGATAATATACGTCGTGACCTTGGCTGTCACTCAACCATTATTACACCATTTTCTGCATGTCTCCTCCCTTTTGCCAGGCCGCTTATCATTCTCTCCC_-_ATGGCTTCGCTTTCTCTCAACCATCAAAACCTCCTCCTGCTTTTGATCCTTCTCTTCTCTTGCGACCTCCACTCATCAACGGCCAACAGCCCAAAAATATCTGACTGGATTTCAAAGGAATCCACAGCGCGGGAGAAGTGGACGCTCAGACAGGCCCCGCAGGATCCCCAACTTAACTGCGATGCCTGGAGGTTCGGCGTAGAAACAAACACTCTGCGCTTTTGGAATGTTGTACCTCCGGAATGCGTGGAATACGTGAAAGACTACATGGTTGGAAGCCAATATCTGTGGGACTCAAACATGGTAGCCAATGAATCCATAGCCTACGTCAACTCTCTCAACCTCTCAGGCGATGGGAAGGACGTTTGGGTATTCGACGTGGATGAAACCCTCCTTTCAAATTTGCCCCTTTATGCAGCTTATAATTACGGGGGAGCGTGGATGGATGATGGTGCTTTTATAAAGTGGGCGGATCTGGCAGAGGCCTCGGCATTGCCTGCCAGTCATAGATTGTACACCCATCTGCTTCAACTGGGCTTCAAGATCTTTCTTTTGACAGGAAGATACGACTACGAGAGGAGTGCCACTGAAAAGAATCTGTTCCGAGCCGGTTATCATTCATGGGAGGCACTTTTGTTGAGGGGACCTGACGAATATGAGATGTCAGCTGTTCTTTATAAATCTGAGAGAAGATTGAAGATTGAGAAAAACGGGTTCAGGATCCGAGGGAACTCTGGTGATCAGTGGAGTGATTTGTCTGGATATTCTTTTGGAGACAGGACCTTCAAGTTGCCCAACCCCATGTATTTCATTGCCTGA___TTTTAATTTATTCATTTGGTTATGTAAAAGGTTACACCTGCTCTGGAAATTTACAGTTAACCATTTAAAGGCTATTATCATATTTTGATTTTGAAGATCTCAATGTCGTGAAACTTTTATTGTCCCTTGCTTTGCAGTTGACAAATAAATAATGTAATCTATCTTATCTGCTATGTTCAGAGAGCTCTATTCTTTATATCTGATTGATGCCATTCCTGTTGCTTGGTGGTGGCACTTTGAAACACAGTGCAGAGTCTGTGTGACCTATGTACACTATACTTCCCAAACTCCAACATGACAAACTGTTGCCTTTAACACTTGGCTATTGTCTGGAAACAATATTTAGTGGCTATTGTCTGGAAAC

Fln Alignment:

sp_v1.1_unigene15818___STANSPKI---SDWISKESTAREKWTLRQAPQDPQLNCDAWRFGVETNTLRFWNVVPPECVEYVKDYMVGSQYLWDSNMVANESIAYVNSLNLSGDGKDVWVFDVDETLLSNLPLYAAYNYGGAWMDDGAFIKWADLAEASALPASHRLYTHLLQLGFKIFLLTGRYDYERSATEKNLFRAGYHSWEALLLRGPDEYEMSAVLYKSERRLKIEKNGFRIRGNSGDQWSDLSGYSFGDRTFKLPNPMYFIA
A9NRU7_______________TTANRPQVFDHSDWISEESTALDKWELKQPPQDPQLNCESWRFGVETNTVRFWSVVPQECVEYVKDYMDGSQYLLDSNVVANVSIAYANSLNLSGDGKDVWVFDVDETLLSNLPLYAAYNYGGADMDDGAFIKWADLAEAPALPASQRLYAHLLQLGFKIFLLTGRYDYERNATEKNLVQAGYHSWEALLLRGPDDYETTAVVYKSGRRLKIEKDGFRIRGNSGDQWSDLSGYSCGDRTFKLPNPMYFIA

SNPs (tot: 68)

Position	A %	C %	G %	T %	Probability
94	56		43		1.0
97	85	14			1.0
98		40	14	44	1.0
101	40			44	1.0
104			15	84	1.0
108	85			11	1.0
110		3	11	85	1.0
111	85	14			1.0
113			14	85	1.0
114	85			14	1.0
265	31		68		1.0
428	77	11	11		0.968132
429	77			22	0.999999
434	77	11			0.968132
435	12	87			0.992554
436	87			12	0.992554
440		12		87	0.992554
443			87	12	0.992554
444	87	12			0.992554
448		87		12	0.992554
449	87	12			0.992554
461	87			12	0.992554
462		87		12	0.992554
466	85		14		0.993533
467	85			14	0.993533
468		85	14		0.993533
472	14		85		0.993533
473		14		85	0.993533
479	85	14			0.993533
483	85		14		0.993533
566		90		10	0.90298
567	90		10		0.90298
569	90	10			0.90298
570		10		90	0.90298
575		90	10		0.90298
578			18	81	0.999994
580		18		81	0.999994
598	10		90		0.90298
849	83	16			0.994512
850		16		83	0.994512
851		83		16	0.994512
854	83		16		0.994512
855		16	83		0.994512
856	83			16	0.994512
859	83	16			0.994512
860			83	16	0.994512
913		20		80	0.995493
915			80	20	0.995493
916	80	20			0.995493
921		20		80	0.995493
925			20	80	0.995493
928		28	71		1.0
929			85	14	0.993533
930	71			28	1.0
931			28	71	1.0
932	57	14		28	1.0
933	14		28	57	1.0
934	28			71	1.0
936		28		71	1.0
939			28	71	1.0
941		28	71		1.0
942	71			28	1.0
944	71			28	1.0
948		28	71		1.0
949	71			28	1.0
951	28	71			1.0
1094	50	50			1.0
1302	75			25	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain