SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15807

Length: 1390 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene15807

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	PIP2;1, PIP2-1, aquaporin; aquaporin-like	-	-	77%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	93%
Blast2go	aquaporin	-	-	90%

Source	GOs	Term	Type	Identity
Blast2go	transmembrane transport	GO:0055085	Biological Process	90%
Blast2go	transporter activity	GO:0005215	Molecular Function	90%
Blast2go	integral to membrane	GO:0016021	Cellular Component	90%

Source	InterPros	Term	Type	Identity
Blast2go	Major intrinsic protein	IPR000425	-	90%
Blast2go	Aquaporin	IPR012269	-	90%
Blast2go	Major intrinsic protein, conserved site	IPR022357	-	90%
Blast2go	Aquaporin-like	IPR023271	-	90%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NSY9

Fln msg:

Fln protein: MTKEDKELEQQGFTSKDYTDPPPAALIDSSEFKLWSFYRALIAEFIATLLFLYITIATVIGHSRNSANCGSVGVLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAVLYMIAQCLGAICGTGLVKAFQKSFYDRYGGGANFVHPGYTKGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYGHKQSWNDQWIFWVGPFVGAALAAGYHQYILRAAVIKALGSYRSNVNA*

Protein Length: 283

Fln nts: ATGGGGCTCATCAAGCCCATTCATCCATTCGTTGCCTTGCAACAACATATGAGTTCTCTGTTCTCCTCTCCCACGCAATTCTGAGCCTCTGTTCCACAAACCCAGAAGAAGTCGAGTTTATAAGTAGTAGCAATAGTTCAGTACCGGCAGCC_-_ATGACAAAGGAAGACAAGGAATTGGAGCAGCAGGGGTTTACCTCCAAGGACTACACAGACCCACCTCCTGCCGCTCTTATTGATTCTAGTGAATTCAAGCTCTGGTCATTTTACAGGGCTCTGATAGCAGAATTCATTGCTACATTGTTGTTTCTCTATATTACCATTGCTACTGTGATTGGGCATTCCAGGAACTCAGCAAACTGTGGGAGTGTTGGGGTGTTGGGTATTGCCTGGTCATTTGGGGGCATGATTTTCGTTTTGGTTTACTGCACCGCTGGTATTTCAGGAGGGCATATCAATCCTGCTGTCACTTTTGGACTGTTTTTAGCTAGGAAGGTTTCCTTGCCAAGAGCTGTTCTGTATATGATAGCACAGTGTTTGGGGGCCATTTGTGGAACTGGATTGGTGAAGGCCTTCCAAAAGAGTTTCTATGATAGATATGGGGGTGGAGCTAACTTTGTGCATCCCGGATACACCAAGGGTGTGGGCTTGGCTGCTGAAATCATCGGCACCTTTGTGCTGGTTTACACTGTTTTCTCTGCAACTGATCCCAAACGCAGTGCTAGGGACTCCCATGTTCCTGTCTTGGCTCCATTGCCTATTGGGTTTGCTGTTTTCATGGTGCACTTGGCTACCATTCCCATCACTGGTACCGGCATCAACCCTGCAAGGAGTTTCGGAGCAGCAGTGATTTATGGCCACAAACAATCCTGGAATGACCAATGGATTTTTTGGGTGGGTCCTTTCGTTGGAGCTGCATTAGCTGCTGGCTACCACCAGTACATTCTGAGAGCAGCGGTCATAAAGGCCCTGGGGTCGTACCGAAGCAATGTTAATGCGTAA___TTAGGCAACACTCGTTGTTAGTTGTAGTGTCTATGAATCAAGTCCGGAGGTTTGCAATACATGAATATTAAGTACTATGAACTATTATGTCTAGCGCGGGATGAGACCAAGTAGCAACACAGTGAGGAGTGTAGCTTCTTCGCTCAGCACCTTCATTAGGGGTGCATTGTCAACTGCCAAGAGTCCGAGAGGTTGAGCGAATCTGTATTGAATTCAGTGCTGTTGCTGAAGCAATATGATTGCTTGTAATATCTGTAGAAGTTGTGAATGAACGAACTCCAAATCATGTATAAACAAGCTACAACGTAAAGGGACATAATCAACAGATTTGATGTTACAACAGAAAACTATGACCAAGAATAAATTTTTACGACTTTTTAATAAAAGTTTTT

Fln Alignment:

sp_v1.1_unigene15807___MTKED-KELEQQGFTSKDYTDPPPAALIDSSEFKLWSFYRALIAEFIATLLFLYITIATVIGHSRNSANCGSVGVLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAVLYMIAQCLGAICGTGLVKAFQKSFYDRYGGGANFVHPGYTKGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYGHKQSWNDQWIFWVGPFVGAALAAGYHQYILRAAVIKALGSYRSNVN
A9NSY9_______________MTKEEGKELEQQGFAPKDYTDPPPAALIDANEFKLWSLYRALIAEFIATLLFLYITIATVIGHSRTSADCGSVGVLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAILYMIAQCLGAICGAGLVEAFQKSFYDRYGGGANFVHPGYTKGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYGHKQSWDDHWIFWVGPFVGAALAAAYHQYILRAAAVKALGSYRSNVD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain