SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15803

Length: 516 nt

Origin of reads: Biogeco_2 Uma

UniGene Fasta

>sp_v1.1_unigene15803
AAGCGTGCGAGGTCGACGGTTACTACATTCCGAAGAACACTCGGCTAATGGTGAACATCTGGGGAATCGGGAGAGATCCGGAGGTGTGGGAGAAGCCGGAGGAGTTCAATCCTGACAGGTTTGTGGGTTCCAAGATCGATCCTCGTGGCAATGACTTCGAGCTCATCCCGTTCGGCGCAGGCAGGCGCATCTGTGCAGGTACTCGCATGGGGATTACGATGGTGGAGTACAATCTGGGGTCGTTGATCCATGCTTTCGATTGGGATGTGCCACCAAACCAGGAGGGGCTCAATATGGACGAAGCATTCGGGCTGGCCCTGCAGAAGGCCGTGCCTCTCGTGGCCAAGGCCTCTCCTCGCCTTCCTCTTCATCTCTACTAATTACTGATATGCCTGCACCATCCAAAAGTTGTTAGTGTTAAAAATAAAGGCTGTTCCCCGTTACCGTGCACTTTACTTTCAAATTCCCTTGAAGCTGTATAATGTGCACTTAGTTTCAAATTCCCACGGGTGTTTG

Ace file of the UniGene sp_v1.1_unigene15803

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Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Flavonoid 3',5'-hydroxylase n=3 Tax=Vinca major RepID=D2K6F8_9GENT	-	-	76%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	94%
Blast2go	cytochrome p450	-	-	90%

Source	ECs	Term	Type	e value	Identity
Blast2go	Flavonoid 3',5'-hydroxylase.	EC:1.14.13.88	-	0.0	90%

Source	KEGGs	Term	Identity
Blast2go	Flavonoid biosynthesis	00941	90%
Blast2go	Flavone and flavonol biosynthesis	00944	90%
Blast2go	Biosynthesis of secondary metabolites	01110	90%

Source	GOs	Term	Type	Identity
Blast2go	oxidation-reduction process	GO:0055114	Biological Process	90%
Blast2go	heme binding	GO:0020037	Molecular Function	90%
Blast2go	flavonoid 3',5'-hydroxylase activity	GO:0033772	Molecular Function	90%
Blast2go	electron carrier activity	GO:0009055	Molecular Function	90%

Source	InterPros	Term	Type	Identity
Blast2go	Cytochrome P450	IPR001128	-	90%
Blast2go	Cytochrome P450, E-class, group I	IPR002401	-	90%
Blast2go	Cytochrome P450, conserved site	IPR017972	-	90%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LN92

Fln msg: your sequence is shorter than subject: 126 - 452

Fln protein: ACEVDGYYIPKNTRLMVNIWGIGRDPEVWEKPEEFNPDRFVGSKIDPRGNDFELIPFGAGRRICAGTRMGITMVEYNLGSLIHAFDWDVPPNQEGLNMDEAFGLALQKAVPLVAKASPRLPLHLY*

Protein Length: 127

Fln nts: AAGCGTGCGAGGTCGACGGTTACTACATTCCGAAGAACACTCGGCTAATGGTGAACATCTGGGGAATCGGGAGAGATCCGGAGGTGTGGGAGAAGCCGGAGGAGTTCAATCCTGACAGGTTTGTGGGTTCCAAGATCGATCCTCGTGGCAATGACTTCGAGCTCATCCCGTTCGGCGCAGGCAGGCGCATCTGTGCAGGTACTCGCATGGGGATTACGATGGTGGAGTACAATCTGGGGTCGTTGATCCATGCTTTCGATTGGGATGTGCCACCAAACCAGGAGGGGCTCAATATGGACGAAGCATTCGGGCTGGCCCTGCAGAAGGCCGTGCCTCTCGTGGCCAAGGCCTCTCCTCGCCTTCCTCTTCATCTCTACTAA___TTACTGATATGCCTGCACCATCCAAAAGTTGTTAGTGTTAAAAATAAAGGCTGTTCCCCGTTACCGTGCACTTTACTTTCAAATTCCCTTGAAGCTGTATAATGTGCACTTAGTTTCAAATTCCCACGGGTGTTTG

Fln Alignment:

sp_v1.1_unigene15803___ACEVDGYYIPKNTRLMVNIWGIGRDPEVWEKPEEFNPDRFVGSKIDPRGNDFELIPFGAGRRICAGTRMGITMVEYNLGSLIHAFDWDVPPNQEGLNMDEAFGLALQKAVPLVAKAS
B8LN92_______________ACEVNGHYIPKNTRLMVNIWGIGRDPEVWEKPEEFNPERFVGSKIDPRGNDFELIPFGAGRRICAGTRMGITMVEYNLGSLIHAFNWDLPPNQDGLNMDEAFGLALQKAVPLVAKAS

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
259	20		80		0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain