SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15779

Length: 958 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene15779

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	PLAT multi-domain protein	-	-	2.0e-08	14%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	89%
Blast2go	wound stress protein	-	-	0.0	75%

Source	GOs	Term	Type	e value	Identity
Blast2go	cytoplasmic membrane-bounded vesicle	GO:0016023	Cellular Component	0.0	75%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Lipoxygenase, LH2	IPR001024	-	0.0	75%
Blast2go	Lipase/lipooxygenase, PLAT/LH2	IPR008976	-	0.0	75%

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	C %	T %	Probability
766		88	11	0.923564
906	12	87		0.992554
907	14	28	57	1.0

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain