SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15760

Length: 670 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene15760

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	COX VIIa-like protein	-	-	5.0e-20	65%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	94%
Blast2go	cox viia-like protein	-	-	7.2686e-33	84%

Source	ECs	Term	Type	e value	Identity
Blast2go	Cytochrome-c oxidase.	EC:1.9.3.1	-	7.2686e-33	84%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Oxidative phosphorylation	00190		7.2686e-33	84%
Blast2go	Metabolic pathways	01100		7.2686e-33	84%

Source	GOs	Term	Type	e value	Identity
Blast2go	electron carrier activity	GO:0009055	Molecular Function	7.2686e-33	84%
Blast2go	cytochrome-c oxidase activity	GO:0004129	Molecular Function	7.2686e-33	84%
Blast2go	mitochondrial respiratory chain	GO:0005746	Cellular Component	7.2686e-33	84%

Full-Lengther Next Prediction

SNPs (tot: 6)

Position	A %	C %	G %	T %	Probability
364	90		10		0.90298
365			11	88	0.923564
478	75		25		0.996473
549	12	87			1.0
615	81		18		1.0
623		60		40	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain