SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15740

Length: 957 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene15740

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	60S ribosomal protein L12, putative; K02870 large subunit ribosomal protein L12e	-	-	86%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	70%
Blast2go	protein	-	-	91%

Source	ECs	Term	Type	e value	Identity
Blast2go	Protein-synthesizing GTPase.	EC:3.6.5.3	-	0.0	91%

Source	GOs	Term	Type	Identity
Blast2go	translation	GO:0006412	Biological Process	91%
Blast2go	structural constituent of ribosome	GO:0003735	Molecular Function	91%
Blast2go	ribosome	GO:0005840	Cellular Component	91%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Ribosomal protein L11	IPR000911	-	0.0	91%

Full-Lengther Next Prediction

SNPs (tot: 4)

Position	A %	C %	G %	T %	Probability
636	4		95		0.999984
650			2	97	0.972772
690	5			94	0.999997
836		13		86	0.999973

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain