SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15736

Length: 978 nt

Origin of reads: Biogeco_1 Biogeco_2 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene15736

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	hydroxyproline-rich glycoprotein family protein	-	-	2.94273e-44	55%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	76%
Blast2go	hydroxyproline-rich glycoprotein family protein	-	-	0.0	74%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Ricin B-related lectin	IPR008997	-	0.0	74%

Full-Lengther Next Prediction

SNPs (tot: 8)

Position	A %	C %	G %	T %	Probability
430	88		11		0.923564
689	44	50			1.0
712		52		47	1.0
848		39		60	1.0
871		36		63	1.0
904		35		64	1.0
905	66			33	1.0
958	18			81	1.0

SSRs (tot: 1)

Start position	End position	Sequence	Length
822	836	TAGCA TAGCA TAGCA	15

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain