SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15693

Length: 854 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene15693

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ATSLY1; ATSLY1; protein transporter	-	-	8.0e-24	70%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	97%
Blast2go	protein	-	-	2.15653e-34	86%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein secretion	GO:0009306	Biological Process	2.15653e-34	86%
Blast2go	vesicle docking involved in exocytosis	GO:0006904	Biological Process	2.15653e-34	86%
Blast2go	protein transporter activity	GO:0008565	Molecular Function	2.15653e-34	86%
Blast2go	endomembrane system	GO:0012505	Cellular Component	2.15653e-34	86%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Sec1-like protein	IPR001619	-	2.15653e-34	86%

Full-Lengther Next Prediction

SNPs (tot: 16)

Position	A %	C %	G %	T %	Probability
95		20		80	0.995493
97		80		20	0.995493
98	80	20			0.995493
101	80		20		0.995493
105		20	80		0.995493
106		80		20	0.995493
107	80			20	0.995493
114	80			20	0.995493
115	80	20			0.995493
116	20		80		0.995493
117	80	20			0.995493
118			80	20	0.995493
120	20	80			0.995493
662	17	82			1.0
666	88		11		0.999952
709	20		80		0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain