SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15641

Length: 1023 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene15641

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Embryo-abundant protein n=1 Tax=Pinus pinaster RepID=D9IWE0_PINPS	-	-	86%
FL-Next	tr=Embryo-abundant protein; Pinus pinaster (Maritime pine).	-	-	97%
Blast2go	embryo-abundant protein	-	-	69%

Source	GOs	Term	Type	e value	Identity
Blast2go	defense response	GO:0006952	Biological Process	0.0	69%
Blast2go	response to other organism	GO:0051707	Biological Process	0.0	69%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Gnk2-homologous domain	IPR002902	-	0.0	69%

Full-Lengther Next Prediction

SNPs (tot: 18)

Position	A %	C %	G %	T %	Probability
342	90	10			0.90298
376	90	10			0.90298
378		90	10		0.90298
399		90		10	0.90298
452		77		22	1.0
463	15		84		1.0
570	70	30			1.0
615	6		93		0.99903
620		60	39		1.0
669	94		6		0.999998
697			89	10	1.0
750		26		73	1.0
822		14		85	0.993533
828	33		66		0.997452
869		66		33	0.997452
901	25	75			0.996473
954	75	25			0.996473
969		33		66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain