SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15630

Length: 916 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene15630

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	similar to 60S ribosomal protein L29; K02905 large subunit ribosomal protein L29e	-	-	4.0e-12	70%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	100%
Blast2go	protein	-	-	5.27592e-13	95%

Source	ECs	Term	Type	e value	Identity
Blast2go	Protein-synthesizing GTPase.	EC:3.6.5.3	-	5.27592e-13	95%

Source	GOs	Term	Type	e value	Identity
Blast2go	translation	GO:0006412	Biological Process	5.27592e-13	95%
Blast2go	structural constituent of ribosome	GO:0003735	Molecular Function	5.27592e-13	95%
Blast2go	ribosome	GO:0005840	Cellular Component	5.27592e-13	95%

Full-Lengther Next Prediction

SNPs (tot: 12)

Position	A %	C %	G %	T %	Probability
555			89	10	1.0
607	0	51		47	1.0
624	3	95		1	0.999441
656		40		60	1.0
657		59	40		1.0
674		20	20	60	1.0
676	90			10	0.90298
680		33	66		0.997452
700	66		33		0.997452
714			66	33	0.997452
725			66	33	0.997452
726	33			66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain