SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15564

Length: 907 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene15564

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	60S ribosomal protein L26, putative n=2 Tax=Malpighiales RepID=B9SH02_RICCO	-	-	4.0e-38	77%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	96%
Blast2go	l24 ribosomal protein	-	-	1.4013e-45	96%

Source	ECs	Term	Type	e value	Identity
Blast2go	Protein-synthesizing GTPase.	EC:3.6.5.3	-	1.4013e-45	96%

Source	GOs	Term	Type	e value	Identity
Blast2go	translation	GO:0006412	Biological Process	1.4013e-45	96%
Blast2go	structural constituent of ribosome	GO:0003735	Molecular Function	1.4013e-45	96%
Blast2go	large ribosomal subunit	GO:0015934	Cellular Component	1.4013e-45	96%
Blast2go	mitochondrion	GO:0005739	Cellular Component	1.4013e-45	96%

Full-Lengther Next Prediction

SNPs (tot: 43)

Position	A %	C %	G %	T %	Probability
352		25		75	0.996473
376	80		20		0.995493
381		20	80		0.995493
386		80		20	0.995493
387		20	80		0.995493
390			80	20	0.995493
391		20		80	0.995493
449	83			16	0.994512
450			16	83	0.994512
451	16			83	0.994512
455	83		16		0.994512
456		16		83	0.994512
458	83		16		0.994512
459			83	16	0.994512
461	83	16			0.994512
462	83	16			0.994512
463	20		80		0.995493
478		14	85		0.993533
481		14	85		0.993533
486		14	85		0.993533
487	85			14	0.993533
488			85	14	0.993533
490	85		14		0.993533
495			16	83	0.994512
497	83	16			0.994512
499		16	83		0.994512
500		14	71	14	0.984337
501		14	85		0.993533
502	14			85	0.993533
503	85	14			0.993533
505	71			28	1.0
508	85	14			0.993533
512	85			14	0.993533
513	85			14	0.993533
514	85		14		0.993533
516		14		85	0.993533
522	85			14	0.993533
523	85	14			0.993533
524	14		85		0.993533
527		14		85	0.993533
669		2	97		0.938918
671	97	2			0.941605
763		0		89	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain