SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15537

Length: 888 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene15537

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Non-specific lipid-transfer protein n=2 Tax=Picea sitchensis RepID=A9NKX9_PICSI	-	-	4.0e-33	64%
FL-Next	sp=Non-specific lipid-transfer protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	86%
Blast2go	type 1 non specific lipid transfer protein precursor	-	-	3.32495e-33	75%

Source	GOs	Term	Type	e value	Identity
Blast2go	lipid transport	GO:0006869	Biological Process	3.32495e-33	75%
Blast2go	lipid binding	GO:0008289	Molecular Function	3.32495e-33	75%
Blast2go	cytoplasmic membrane-bounded vesicle	GO:0016023	Cellular Component	3.32495e-33	75%

Full-Lengther Next Prediction

SNPs (tot: 8)

Position	A %	C %	G %	T %	Probability
339		83	16		0.995451
343	14		85		0.994477
346		85	14		0.994477
347	85		14		0.994477
409		85		14	0.994477
669		9		90	0.90298
806	6	18		68	1.0
810	20		80		0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain