SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15525

Length: 1356 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene15525

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	inorganic pyrophosphatase (EC:3.6.1.1); K01507 inorganic pyrophosphatase [EC:3.6.1.1]	-	-	81%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	98%
Blast2go	inorganic pyrophosphatase	-	-	90%

Source	ECs	Term	Type	e value	Identity
Blast2go	Inorganic diphosphatase.	EC:3.6.1.1	-	0.0	90%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Oxidative phosphorylation	00190		0.0	90%

Source	ECs	Term	Type	e value	Identity
AutoFact	Inorganic diphosphatase.	EC:3.6.1.1	-	0.0	81%

Source	KEGGs	Term	Type	e value	Identity
AutoFact	Oxidative phosphorylation	00190		0.0	81%

Source	GOs	Term	Type	Identity
Blast2go	phosphate-containing compound metabolic process	GO:0006796	Biological Process	90%
Blast2go	inorganic diphosphatase activity	GO:0004427	Molecular Function	90%
Blast2go	magnesium ion binding	GO:0000287	Molecular Function	90%
Blast2go	cytoplasm	GO:0005737	Cellular Component	90%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NMY6

Fln msg:

Fln protein: MTPPSADGPAKIPVTPSAEGPRNGGESRFPHPPLNERILSSLSRRSVAAHPWHDLEIGPGAPSVFNCVVEIGKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLVIMQEPVYPGCFLRARAIGVMPMIDQGEKDDKIIAVCADDPEYRHYKDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASTACEVIQHSMDLYATYIVESLRR*

Protein Length: 230

Fln nts: ATGGGGGCCCTCCATTCATTCCCATTGCTTAAATCGGACGCCTTCCCTCCTATAAACGTACAGGCGTCGTGACCTAGATGGGGACAGCACAGCACAGCATCACTGCTCTGAGAGGCGCTATACCTGGTTCCAAGCTTCGAGAATTTGGGGATTTAGTGGCTGATACACCAGGTCCAGTCAACTGTAATCTGCCAAGGATCAACTGGTAGGCCTGTTCCACATTAGTTGAAGCGAAGACACTTGTTTCACTGTATTCAAAC_-_ATGACTCCACCTAGTGCTGATGGTCCAGCAAAGATACCTGTTACACCTAGTGCTGAAGGTCCAAGAAACGGAGGAGAATCACGCTTTCCTCATCCACCTCTGAATGAAAGGATTCTTTCATCTCTATCACGTAGATCTGTTGCTGCACATCCTTGGCATGATCTTGAGATTGGACCTGGAGCTCCTTCGGTGTTCAATTGTGTTGTGGAAATTGGGAAAGGGAGTAAGGTGAAATATGAGCTGGACAAAAAAACCGGTCTGATCAAGGTAGATCGAATTCTGTACTCATCAGTTGTTTATCCCCATAATTATGGTTTCATTCCACGTACCCTGTGCGAGGATAATGATCCATTGGATGTGCTGGTCATCATGCAGGAACCTGTTTATCCAGGATGCTTTCTCCGGGCTAGAGCCATTGGTGTGATGCCTATGATTGATCAGGGAGAAAAAGATGATAAGATAATTGCTGTGTGCGCTGATGACCCCGAGTACCGCCATTACAAAGACATTAAGGAACTTCCTCCACATCGTTTAGCAGAAATTCGACGCTTCTTTGAGGATTACAAGAAAAATGAGAACAAGGAAGTTGCTGTGAATGATTTCCTTCCTGCCTCTACTGCTTGTGAAGTTATCCAACACTCAATGGACTTGTATGCTACATACATCGTTGAAAGTTTACGACGGTGA___AAAGTGCGACAACGAATGATAACTACAACTATGTGAAAACCAGAAATTCAAATATGTGCAAATAATAGTGCTAAATTCAAGTTAGGGATTGTTCATGTCAGTACTGGTAAAACAAAGGGGTATCTTATATGTATCGCCTTGAAATTTTGAGAATTATTAAATGCCAGCAAGACTTGTCGATAGGTTTCTTCGAAAATGTTTCTGGCTTATGATGCATGTAGCATATAATTTATTTTTGCATGGAAAAATTATTACATTTCCCCGTGTTGGAAAGAGCCAAGTTGATCCAATATGGACACTTCCCGGCTAATTATTTCAAGTAATTTTGATATATGTATGTACTTGGCTCTGCCGAGACCCTTTCGAGTGTGTAATTTGATATCTTTGGTTTTTAACGTTTTTGCATTTC

Fln Alignment:

sp_v1.1_unigene15525___PSAEGPRNGGESRFPHPPLNERILSSLSRRSVAAHPWHDLEIGPGAPSVFNCVVEIGKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLVIMQEPVYPGCFLRARAIGVMPMIDQGEKDDKIIAVCADDPEYRHYKDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASTACEVIQHSMDLYATYIVESLRR
A9NMY6_______________PSAEGPRNGGESRFPHPPLNERILSSLSRRSVAAHPWHDLEIGPGAPSVFNCVVEIGKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLVLMQEPIYPGCFLRARAIGVMPMIDQGEKDDKIIAVCADDPEYRHYTDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASTACEVIQHSMDLYATYIVESLRR

SNPs (tot: 12)

Position	A %	C %	G %	T %	Probability
800	95		4		0.999983
1309	14	85			1.0
1310		97		2	0.999714
1321	2		97		0.946738
1322		2		97	0.962263
1326	3			96	0.99245
1327	3			96	0.99245
1328	3		96		0.991825
1337	22	4			1.0
1343	5		41	41	1.0
1345	50	8		8	1.0
1347	16	83			0.994512

SSRs (tot: 1)

Start position	End position	Sequence	Length
84	99	ACAGC ACAGC ACAGC A	16

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain