SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15408

Length: 788 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene15408

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Chaperone protein dnaJ 11, chloroplast precursor, putative	-	-	1.0e-15	43%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	69%
Blast2go	chaperone protein dnaj chloroplast	-	-	0.0	59%

Source	GOs	Term	Type	e value	Identity
Blast2go	heat shock protein binding	GO:0031072	Molecular Function	0.0	59%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Heat shock protein DnaJ, N-terminal	IPR001623	-	0.0	59%
Blast2go	Heat shock protein DnaJ	IPR003095	-	0.0	59%

Full-Lengther Next Prediction

SNPs (tot: 28)

Position	A %	C %	G %	T %	Probability
191		85	14		0.993533
198		57		42	1.0
212			71	28	1.0
241	87		12		0.992554
242		87		12	0.992554
244		87	12		0.992554
245			87	12	0.992554
248		12	87		0.992554
250		90		10	0.90298
251			90	10	0.90298
252	70		10	20	0.999998
253	70	20	10		0.999998
254	70	10	20		0.999998
257	20			80	0.999996
258		30		70	1.0
259	80	20			0.999996
260		10		90	0.90298
262	70	10	20		0.999998
263	10		90		0.90298
264	80	20			0.999996
266			22	77	0.999999
269		22	77		0.999999
270			77	22	0.999999
375		60		40	1.0
452		87		12	0.992554
513	25			75	0.996473
586	60		40		1.0
697	30		69		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain