SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15394

Length: 1065 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene15394

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Snf1-kinase beta subunit, plants, putative n=1 Tax=Ricinus communis RepID=B9SCG7_RICCO	-	-	8.0e-35	66%
FL-Next	sp=SNF1-related protein kinase regulatory subunit beta-3; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	51%
Blast2go	akin beta3	-	-	0.0	77%

Source	GOs	Term	Type	e value	Identity
Blast2go	kinase activity	GO:0016301	Molecular Function	0.0	77%
Blast2go	protein binding	GO:0005515	Molecular Function	0.0	77%

Source	InterPros	Term	Type	e value	Identity
Blast2go	5-AMP-activated protein kinase, beta subunit, interaction domain	IPR006828	-	0.0	77%

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	G %	Probability
465	66	33	0.997452
466	66	33	0.997452
612	86	13	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain