SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15350

Length: 704 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene15350

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	FK506-binding protein, putative n=1 Tax=Ricinus communis RepID=B9R9N7_RICCO	-	-	62%
FL-Next	sp=FK506-binding protein 2; Vicia faba (Broad bean) (Faba vulgaris).	-	-	51%
Blast2go	protein	-	-	72%

Source	ECs	Term	Type	e value	Identity
Blast2go	Peptidylprolyl isomerase.	EC:5.2.1.8	-	0.0	72%

Source	GOs	Term	Type	Identity
Blast2go	protein folding	GO:0006457	Biological Process	72%
Blast2go	nucleosome assembly	GO:0006334	Biological Process	72%
Blast2go	histone binding	GO:0042393	Molecular Function	72%
Blast2go	peptidyl-prolyl cis-trans isomerase activity	GO:0003755	Molecular Function	72%
Blast2go	FK506 binding	GO:0005528	Molecular Function	72%
Blast2go	nucleolus	GO:0005730	Cellular Component	72%
Blast2go	cytoplasmic membrane-bounded vesicle	GO:0016023	Cellular Component	72%
Blast2go	chloroplast thylakoid lumen	GO:0009543	Cellular Component	72%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain	IPR001179	-	0.0	72%
Blast2go	Peptidyl-prolyl cis-trans isomerase, FKBP-type	IPR023566	-	0.0	72%

Full-Lengther Next Prediction

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
461			3	82	1.0
629	11	88			0.999937

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain