SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15332

Length: 2543 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

>sp_v1.1_unigene15332
TTCCACCCACATCAAAATAATTACAACTGAAAACAAAAACCAAACCACCTGAAAGTCCAATCCGACCAGTCCGTCAAATCGAAGTTACTGGCCGGCAGACTCGCCGGCGTCGACTTGCAGCAAGTTTGAAACACCTACCACTATTATACACAACAAAAGCCTGCCTATCTCTGCACCATTCCAAGGGTTTTCGAGAACTGGAATTTTCCTTGGGTTACCTGATTCGGAGAGTCCATCGCTTAACAATCAGCGGCCATTTCACGGCTGTGCAGACTGTACTGCCCTGATCCGAACGGGATTGATATTGAAGGAAAAAATGAAGGAATCCGTTTCCAACGGCGATGTTTCTGCACACAAGCAAGCAGCTCTAACGAGGGACATTTCTGTCTACAGTGAGGTGCAATCGAGCCGTCTGGATCATCAGCTCCGGTTGCCCAGCGTGTTAAAAGCGCCATTTAAGCTCGTCAGTGGACCTCCTACTACCGCTGCTGGAAGTCCAGAGGAGATTGCTAAACTATTTCCGCAACTCTACGGACAGCCATCGGTCCATCTCGAGCCGAGCGATACAGCGGCTTTACAATCAGACCGAAAATTGAACATCGGTGTCGTGCTTTCTGGTGGCCAGGCTCCAGGTGGTCACAATGTCATTGCGGGATTGTTCGATTACGTGCAAAATAACACTAAGGATAGCACTTTGTTTGGATTCAAAGGTGGCCCAGCAGGAATAATGAAATGTAAATATGTTGAGATGACAAAAGAGTTTGTGTATCCATATCGCAACCAGGGTGGCTTTGACATTATTTGCAGTGGCCGAGACAAAATTGAGACTCCTGAACAGTTCAAGCAAGCGGAGGAGACTGTACTGAAGCTTGATTTAGATGGTCTTGTTGTCATTGGTGGAGATGATTCAAATACAAATGCCTGCCTTCTTGCAGAAAAATTCAGAGAGAAAAAGTTAAAAACACAGGTGATTGGCTGTCCAAAAACAATTGATGGTGATCTTAAGTCCAAGGAAGTTCCAACAAGTTTTGGGTTTGACACAGCTTGTAAGATTTATGCAGAGATGATAGGGAATGTGATGGTTGATGCGAGATCAACTGGAAAATATTATCACTTTGTGAGGCTTATGGGCCGTGCTGCTTCACACATCACACTAGAATGTGCTTTGCAGACACATCCCAACATTGCAATAATAGGCGAGGAGGTAGCTTTGAAAAAACAAACTATTCAAGGTGTCACGGGTTACATTACAGATGTGATCTGTAAACGAGCAGAGCTTGGGTACAATTATGGTGTTTTACTTATACCAGAGGGTCTTATTGACTTCATTCCAGAGGTGCAACAGCTGATTGCTGAGCTGAATGAGATTTTGGCTCATGATGTAATAGATGAAGGTGGCCTTTGGAAACAAAAACTGCAACCTCAATGCCGAACACTCTTTGACTTTTTACCTGAAAGTATTCGAGAGCAATTGATGCTTGAAAGGGATCCTCATGGAAATGTGCAGGTTGCAAAAATAGAGACTGAAAAAATGTTTATATCGATGGTTGAAACTGAATTGGAAAAAAGAAAGGAAGAGGGGACCTACAAAGGACATTTTAAAGGGCAATCACATTTCTTTGGCTATGAGGGAAGATGTGGGTTGCCGACAAATTTTGATGCAACTTACTGCTATGCTCTGGGGTATGCAGCAGGAGTACTTCTTCATGCCGGACATACAGGACTCATAGCTTCGGTTGGCAATTTGGCAGCACCAGCAGAAGATTGGCTAGTTGGTGGAACTGCTCTTACACAGCTCATGGATGTTGAGAGACGAAAAGGAAAGTTCAAGCCTGTTATTCAGAAAGCTATGGTGGCACTAGATGGAGCACCGTTCAAGAAGTTTGCTTCCTTGCGGGAAGAATGGGCTTTGCAGAATAAATACATCAGTCCAGGTCCTATTCAGTTTTTTGGCCCGACTGCAGACAACAGCAACTTCACGTTGATGTTAGAACTTGGAGCAATGGCTTGACTCTAGAAGTTCAGAGCATGCCCGAGGAACCATGTTACTTCAAGGATTCAGGAATTTCTCCCGAATGCACTGTTGGTTGAACGAAGCTCATGATTGAAGTAGATGCTTGGTAACATTTTCTCGTTAGTTTGTCATTCTCGTCCGCCCTCTGGTTATGGGTGAAACACTGAAACGTTGATAGCTTAGCCAACCTTTTGGAAAGGTGGCATGCTTGTCAAATTTCAAATAAAATTTTGCATTCTTTGGTAGAAGCATATGCTTTACCCAGTGCATTTGAGACAGACCTGAAGTATGCTATAATTGTGTCACTTAGAGTAATATGCTACTTGACAGAATCTTTAGCAATTTGGTTTCTGTTATAATATGAGAATAGATAAAATACACCTTTTTATCAGGCGATTATGAAGCAGTTTTATCATGCGAGAATAAAGTTTCCTTGTTCAAAATAAGTCCGTTGTGCCTGTACAGCAGGAATTTAAACCGGTATGGCTTATACATAGTTAATACAATCCAATACAGAGGCATGTTTTAG

Ace file of the UniGene sp_v1.1_unigene15332

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	pyrophosphate-dependent phosphofructokinase (EC:2.7.1.90); K00895 pyrophosphate--fructose-6-phosphate 1-phosphotransferase [EC:2.7.1.90]	-	-	75%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	95%
Blast2go	pyrophosphate-dependent phosphofructokinase beta subunit	-	-	86%

Source	ECs	Term	Type	e value	Identity
Blast2go	6-phosphofructokinase.	EC:2.7.1.11	-	0.0	86%

Source	KEGGs	Term	Type	Identity
Blast2go	Glycolysis / Gluconeogenesis	00010		86%
Blast2go	Pentose phosphate pathway	00030		86%
Blast2go	Fructose and mannose metabolism	00051		86%
Blast2go	Galactose metabolism	00052		86%
Blast2go	Methane metabolism	00680		86%
Blast2go	Biosynthesis of phenylpropanoids	01061		86%
Blast2go	Biosynthesis of terpenoids and steroids	01062		86%
Blast2go	Biosynthesis of alkaloids derived from shikimate pathway	01063		86%
Blast2go	Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid	01064		86%
Blast2go	Biosynthesis of alkaloids derived from histidine and purine	01065		86%
Blast2go	Biosynthesis of alkaloids derived from terpenoid and polyketide	01066		86%
Blast2go	Biosynthesis of plant hormones	01070		86%
Blast2go	Metabolic pathways	01100		86%
Blast2go	Biosynthesis of secondary metabolites	01110		86%
Blast2go		EC:2.7.1.9-	-	86%

Source	ECs	Term	Type	e value	Identity
AutoFact		EC:2.7.1.9-	-	0.0	75%

Source	GOs	Term	Type	Identity
Blast2go	response to cadmium ion	GO:0046686	Biological Process	86%
Blast2go	glycolysis	GO:0006096	Biological Process	86%
Blast2go	photosynthesis	GO:0015979	Biological Process	86%
Blast2go	6-phosphofructokinase activity	GO:0003872	Molecular Function	86%
Blast2go	diphosphate-fructose-6-phosphate 1-phosphotransferase activity	GO:0047334	Molecular Function	86%
Blast2go	ATP binding	GO:0005524	Molecular Function	86%
Blast2go	pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex	GO:0010318	Cellular Component	86%
Blast2go	6-phosphofructokinase complex	GO:0005945	Cellular Component	86%
Blast2go	cell wall	GO:0005618	Cellular Component	86%
Blast2go	membrane	GO:0016020	Cellular Component	86%
Blast2go	plastid	GO:0009536	Cellular Component	86%

Source	InterPros	Term	Type	Identity
Blast2go	Phosphofructokinase domain	IPR000023	-	86%
Blast2go	Pyrophosphate-dependent phosphofructokinase PfpB	IPR011183	-	86%
Blast2go	Pyrophosphate-dependent phosphofructokinase, alpha-helical	IPR013981	-	86%
Blast2go	Phosphofructokinase	IPR022953	-	86%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9P0C2

Fln msg: your sequence is longer than subject: 565 - 317

Fln protein: MKESVSNGDVSAHKQAALTRDISVYSEVQSSRLDHQLRLPSVLKAPFKLVSGPPTTAAGSPEEIAKLFPQLYGQPSVHLEPSDTAALQSDRKLNIGVVLSGGQAPGGHNVIAGLFDYVQNNTKDSTLFGFKGGPAGIMKCKYVEMTKEFVYPYRNQGGFDIICSGRDKIETPEQFKQAEETVLKLDLDGLVVIGGDDSNTNACLLAEKFREKKLKTQVIGCPKTIDGDLKSKEVPTSFGFDTACKIYAEMIGNVMVDARSTGKYYHFVRLMGRAASHITLECALQTHPNIAIIGEEVALKKQTIQGVTGYITDVICKRAELGYNYGVLLIPEGLIDFIPEVQQLIAELNEILAHDVIDEGGLWKQKLQPQCRTLFDFLPESIREQLMLERDPHGNVQVAKIETEKMFISMVETELEKRKEEGTYKGHFKGQSHFFGYEGRCGLPTNFDATYCYALGYAAGVLLHAGHTGLIASVGNLAAPAEDWLVGGTALTQLMDVERRKGKFKPVIQKAMVALDGAPFKKFASLREEWALQNKYISPGPIQFFGPTADNSNFTLMLELGAMA*

Protein Length: 566

Fln nts: TTCCACCCACATCAAAATAATTACAACTGAAAACAAAAACCAAACCACCTGAAAGTCCAATCCGACCAGTCCGTCAAATCGAAGTTACTGGCCGGCAGACTCGCCGGCGTCGACTTGCAGCAAGTTTGAAACACCTACCACTATTATACACAACAAAAGCCTGCCTATCTCTGCACCATTCCAAGGGTTTTCGAGAACTGGAATTTTCCTTGGGTTACCTGATTCGGAGAGTCCATCGCTTAACAATCAGCGGCCATTTCACGGCTGTGCAGACTGTACTGCCCTGATCCGAACGGGATTGATATTGAAGGAAAAA_-_ATGAAGGAATCCGTTTCCAACGGCGATGTTTCTGCACACAAGCAAGCAGCTCTAACGAGGGACATTTCTGTCTACAGTGAGGTGCAATCGAGCCGTCTGGATCATCAGCTCCGGTTGCCCAGCGTGTTAAAAGCGCCATTTAAGCTCGTCAGTGGACCTCCTACTACCGCTGCTGGAAGTCCAGAGGAGATTGCTAAACTATTTCCGCAACTCTACGGACAGCCATCGGTCCATCTCGAGCCGAGCGATACAGCGGCTTTACAATCAGACCGAAAATTGAACATCGGTGTCGTGCTTTCTGGTGGCCAGGCTCCAGGTGGTCACAATGTCATTGCGGGATTGTTCGATTACGTGCAAAATAACACTAAGGATAGCACTTTGTTTGGATTCAAAGGTGGCCCAGCAGGAATAATGAAATGTAAATATGTTGAGATGACAAAAGAGTTTGTGTATCCATATCGCAACCAGGGTGGCTTTGACATTATTTGCAGTGGCCGAGACAAAATTGAGACTCCTGAACAGTTCAAGCAAGCGGAGGAGACTGTACTGAAGCTTGATTTAGATGGTCTTGTTGTCATTGGTGGAGATGATTCAAATACAAATGCCTGCCTTCTTGCAGAAAAATTCAGAGAGAAAAAGTTAAAAACACAGGTGATTGGCTGTCCAAAAACAATTGATGGTGATCTTAAGTCCAAGGAAGTTCCAACAAGTTTTGGGTTTGACACAGCTTGTAAGATTTATGCAGAGATGATAGGGAATGTGATGGTTGATGCGAGATCAACTGGAAAATATTATCACTTTGTGAGGCTTATGGGCCGTGCTGCTTCACACATCACACTAGAATGTGCTTTGCAGACACATCCCAACATTGCAATAATAGGCGAGGAGGTAGCTTTGAAAAAACAAACTATTCAAGGTGTCACGGGTTACATTACAGATGTGATCTGTAAACGAGCAGAGCTTGGGTACAATTATGGTGTTTTACTTATACCAGAGGGTCTTATTGACTTCATTCCAGAGGTGCAACAGCTGATTGCTGAGCTGAATGAGATTTTGGCTCATGATGTAATAGATGAAGGTGGCCTTTGGAAACAAAAACTGCAACCTCAATGCCGAACACTCTTTGACTTTTTACCTGAAAGTATTCGAGAGCAATTGATGCTTGAAAGGGATCCTCATGGAAATGTGCAGGTTGCAAAAATAGAGACTGAAAAAATGTTTATATCGATGGTTGAAACTGAATTGGAAAAAAGAAAGGAAGAGGGGACCTACAAAGGACATTTTAAAGGGCAATCACATTTCTTTGGCTATGAGGGAAGATGTGGGTTGCCGACAAATTTTGATGCAACTTACTGCTATGCTCTGGGGTATGCAGCAGGAGTACTTCTTCATGCCGGACATACAGGACTCATAGCTTCGGTTGGCAATTTGGCAGCACCAGCAGAAGATTGGCTAGTTGGTGGAACTGCTCTTACACAGCTCATGGATGTTGAGAGACGAAAAGGAAAGTTCAAGCCTGTTATTCAGAAAGCTATGGTGGCACTAGATGGAGCACCGTTCAAGAAGTTTGCTTCCTTGCGGGAAGAATGGGCTTTGCAGAATAAATACATCAGTCCAGGTCCTATTCAGTTTTTTGGCCCGACTGCAGACAACAGCAACTTCACGTTGATGTTAGAACTTGGAGCAATGGCTTGA___CTCTAGAAGTTCAGAGCATGCCCGAGGAACCATGTTACTTCAAGGATTCAGGAATTTCTCCCGAATGCACTGTTGGTTGAACGAAGCTCATGATTGAAGTAGATGCTTGGTAACATTTTCTCGTTAGTTTGTCATTCTCGTCCGCCCTCTGGTTATGGGTGAAACACTGAAACGTTGATAGCTTAGCCAACCTTTTGGAAAGGTGGCATGCTTGTCAAATTTCAAATAAAATTTTGCATTCTTTGGTAGAAGCATATGCTTTACCCAGTGCATTTGAGACAGACCTGAAGTATGCTATAATTGTGTCACTTAGAGTAATATGCTACTTGACAGAATCTTTAGCAATTTGGTTTCTGTTATAATATGAGAATAGATAAAATACACCTTTTTATCAGGCGATTATGAAGCAGTTTTATCATGCGAGAATAAAGTTTCCTTGTTCAAAATAAGTCCGTTGTGCCTGTACAGCAGGAATTTAAACCGGTATGGCTTATACATAGTTAATACAATCCAATACAGAGGCATGTTTTAG

Fln Alignment:

sp_v1.1_unigene15332___MKESVSNGDVSAHKQAALTRDISVYSEVQSSRLDHQLRLPSVLKAPFKLVSGPPTTAAGSPEEIAKLFPQLYGQPSVHLEPSDTAALQSDRKLNIGVVLSGGQAPGGHNVIAGLFDYVQNNTKDSTLFGFKGGPAGIMKCKYVEMTKEFVYPYRNQGGFDIICSGRDKIETPEQFKQAEETXXXXXXXXXXXXXXXXSNTNACLLAEKFREKKLKTQVIGCPKTIDGDLKSKEVPTSFGFDTACKIYAEMIGNVMVDARSTGKYYHFVRLMGRAASHITLECALQTHPNIAIIGEEV
A9P0C2_______________MKEFVSNGDVSAHKQAALTRDISVYSEVQSSRLDHQLPLPSVLEAPFKLVSGPPTTAAGSPEDIAKLFPQLYGQPSVHLVPSDTAALKSDRKLNIGVVLSGGQAPGGHNVIAGLFDYVQNNTKDSRLFGFNGGPAGIMKCKYVEMTKEFVYPYRNQGGFDIICSGRDKIETPEQFRQAEETVLKLDLDGLVVIGGDDSNTNACLLAEKFREKNLKTQVIGCPKTIDGDLKSKEVPTSFGFDTACKIYAEMIGNVMVDARSTGKYYHFVRLMGRAASHITLECALQTHPNITVIGEEV

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
2475		50	50		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain