SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15330

Length: 2599 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

>sp_v1.1_unigene15330
ATGGGACAAATCATAGGTAAGGTTTTTCGCAGAAGCACTTTTGCCTAACTCTGGGGATAAAGATTTTGCCACATTCGAACGTACAGTCTGGTAATAGTTCTCAAGGACGCCGACTTCAGGGCCGTGCCGGTGGTGAAGAAGTCAGATCTTCAACGGGTTTGGACGCGCTAAAAGATATTTAAGCAGTGCGGGGCGAGTGTTCTAAACGCGCGCTTCTATCTTGAGCTCCCGTCCGCCGGCCGATACAGGTCTCTTTGGATATCTTTGGATCTTTGAGACCGATCAGGGTTTCTTTGCTGGATTCCCTTTTCATTTGCACTTATCTGCCCAATTTCACTTCAGCAGGTAAAGATGGTGAAGATCTGCTGTCTTGGAGCTGGATATGTTGGTGGGCCAACAATGGCCATCATTGCACTAAAATGTCCTGCCATTGAAGTCGTTGTCGTAGATATTTCATCTGCAAGGATTGCCGCATGGAATAGTGACCAGCTGCCAATCTATGAGCCTGGTCTTGATGAAGTCGTAAAAGGTTGCAGAGGGAAAAACTTGTTTTTCAGCTCTGATGTGGAGAAGCATGTTTTGGAAGCTGACATTATATTTGTGTCTGTGAACACACCCACTAAAACCCGGGGTCTTGGGGCTGGGAAGGCTGCAGATCTAACCTATTGGGAAAGCGCAGCTCGAATGATTGCGGACGTTTCAAAATCTGACAAAATTGTTGTGGAGAAATCTACAGTTCCAGTAAAAACAGCAGAGGCAATTGAGAAAATTCTCACACATAATACCAAGGGAATTAATTTCCAAATTCTCTCAAATCCAGAGTTTCTTGCTGAAGGAACTGCAATTCAAGACCTTCTAAACCCTGATCGTGTACTTATTGGAGGTCGGGAGACTCCAGAAGGACAAAAAGCAGTGGAAGCTTTGAAGGCAGTTTATGCCAACTGGGTTCCTGAAGATAGGATTATTGCTACAAATCTGTGGTCTGCAGAGCTTTCAAAGCTTGCCGCAAATGCAGTTTTGGCCCAGAGAATCTCATCAGTAAATGCAATGTCAGCTCTGTGTGAAGCAACTGGGGCAGATGTCACAGAAGTTGCTTATGCTGTTGGTAAGGATTCGAGAATTGGTCCAAAGTTCTTGAATGCTAGTGTTGGTTTTGGTGGGTCTTGTTTTCAGAAGGATATTCTGAACCTGATTTACATTTGTGAGTGCAATGGACTTATAGAAGTTGCAAACTACTGGAAAGGAGTCATTAAGATCAATGACTATCAGAAGTCAAGGTTTGTAAACCGTGTGGTTTCCTCGATGTTCAACACAGTATCAGGAAAGAAAATTGCAGTTCTAGGTTTTGCATTCAAGAAGGATACTGGTGATACTCGAGAAACTCCAGCCATTGATGTATGCAAGGGGCTTCTTGGAGACAAAGCGAATATCAGCATTTATGACCCACAAGTAACAGAGGATCAAATTCAGAGGGACCTCTCCATGAACAAATTTGATTGGGACCATCCTCCTCATTTGCAACCTATGAGCCCTTCTGCTATCAAGCAAGTCAGCGTGGTTTGGGATGCTTATGAAGCAACCAAAGATGCTCATGGAGTGTGCATTTTAACAGAGTGGGATGAGTTCAAGACTCTGGACTTTCAGAAAATTCATGACAATATGCAGAAACCTGCATTCATTTTTGATGGTCGGAACATTGTTGATGTGGAGAAGCTTAGGAAGATTGGTTTCATTGTTTACTCCATTGGTAAGCCTCTAGATCCGTGGGTGAAAGACCTCCCTGCATCAGCATAGAAGATTGAAGTCCTTTTTGTCTCTTCATATTAGACAGTGGTTCTGCAAACTTTACTGTCAGAAGAGGCTTTCAGAAGATGGTGATTGAACTTGATTCTTAGAAACCATGGGAATGGGTTTCACTTTTCACGTTGCTTTGATTAGGTGGATGGTATTAGCTATCATTATTTCTAGAAGGATCTATTGTTTTTAGCACAGATGGAATCAATAACTTAGAAACTTTTTGTTTGAGTAGCATATCTTTTAGCAGAATCCTCTGCCATTGATTATCTGGAGTTCTATATAAAGGATCATTCAGATGGTATTGTTTTCCGGTCTGGTAAAATCCTATGGGGTTGTAGGGTTGTCTGGATTTTTGGAGATTTTAAACTCCTGATATTTTTTTTCTAGTCCTTTGATACCTAGTTGCATATGCCTACATTTTTGAAATTCTATGGGCATCTATGTGCGTTATATTCTAGAATTTGAAGGTTTTGCCCTGAAGTTTGGAGCTATATGGTAATCTGTGACGTGTTCCATTTTATCCAATGAATGCTCTGCCTGGAAATTTGGTGAATTGGTATTTCTATAAATGTGACTGGTTTTATCTTACTGATTCTTAGTAAAAGGATCAATTGTTCTAACCATAAAACATGGACTCTGCAAGGTGATGTTGATATTAATATATGCATTTGTGGAGATATCAGTGTTTTACTGTAGAAATATCTGCAAGAAGCATTGACAATGAAATGCATTTATTAGGAAATTTATCTTGTCAAATATCTCAGTTTTATTAAGTAGAACATTGCAGGCATGGTTCTCAAAT

Ace file of the UniGene sp_v1.1_unigene15330

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	UDP-glucose dehydrogenase n=3 Tax=Spermatophyta RepID=Q6RK07_9MAGN	-	-	90%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	98%
Blast2go	udp-glucose 6- expressed	-	-	95%

Source	ECs	Term	Type	e value	Identity
Blast2go	UDP-glucose 6-dehydrogenase.	EC:1.1.1.22	-	0.0	95%

Source	KEGGs	Term	Identity
Blast2go	Pentose and glucuronate interconversions	00040	95%
Blast2go	Ascorbate and aldarate metabolism	00053	95%
Blast2go	Starch and sucrose metabolism	00500	95%
Blast2go	Amino sugar and nucleotide sugar metabolism	00520	95%
Blast2go	Metabolic pathways	01100	95%
Blast2go	Biosynthesis of secondary metabolites	01110	95%

Source	GOs	Term	Type	Identity
Blast2go	oxidation-reduction process	GO:0055114	Biological Process	95%
Blast2go	UDP-glucose 6-dehydrogenase activity	GO:0003979	Molecular Function	95%
Blast2go	NAD binding	GO:0051287	Molecular Function	95%
Blast2go	cytoplasmic membrane-bounded vesicle	GO:0016023	Cellular Component	95%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LQ50

Fln msg:

Fln protein: MVKICCLGAGYVGGPTMAIIALKCPAIEVVVVDISSARIAAWNSDQLPIYEPGLDEVVKGCRGKNLFFSSDVEKHVLEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNTKGINFQILSNPEFLAEGTAIQDLLNPDRVLIGGRETPEGQKAVEALKAVYANWVPEDRIIATNLWSAELSKLAANAVLAQRISSVNAMSALCEATGADVTEVAYAVGKDSRIGPKFLNASVGFGGSCFQKDILNLIYICECNGLIEVANYWKGVIKINDYQKSRFVNRVVSSMFNTVSGKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKANISIYDPQVTEDQIQRDLSMNKFDWDHPPHLQPMSPSAIKQVSVVWDAYEATKDAHGVCILTEWDEFKTLDFQKIHDNMQKPAFIFDGRNIVDVEKLRKIGFIVYSIGKPLDPWVKDLPASA*

Protein Length: 482

Fln nts: ATGGGACAAATCATAGGTAAGGTTTTTCGCAGAAGCACTTTTGCCTAACTCTGGGGATAAAGATTTTGCCACATTCGAACGTACAGTCTGGTAATAGTTCTCAAGGACGCCGACTTCAGGGCCGTGCCGGTGGTGAAGAAGTCAGATCTTCAACGGGTTTGGACGCGCTAAAAGATATTTAAGCAGTGCGGGGCGAGTGTTCTAAACGCGCGCTTCTATCTTGAGCTCCCGTCCGCCGGCCGATACAGGTCTCTTTGGATATCTTTGGATCTTTGAGACCGATCAGGGTTTCTTTGCTGGATTCCCTTTTCATTTGCACTTATCTGCCCAATTTCACTTCAGCAGGTAAAG_-_ATGGTGAAGATCTGCTGTCTTGGAGCTGGATATGTTGGTGGGCCAACAATGGCCATCATTGCACTAAAATGTCCTGCCATTGAAGTCGTTGTCGTAGATATTTCATCTGCAAGGATTGCCGCATGGAATAGTGACCAGCTGCCAATCTATGAGCCTGGTCTTGATGAAGTCGTAAAAGGTTGCAGAGGGAAAAACTTGTTTTTCAGCTCTGATGTGGAGAAGCATGTTTTGGAAGCTGACATTATATTTGTGTCTGTGAACACACCCACTAAAACCCGGGGTCTTGGGGCTGGGAAGGCTGCAGATCTAACCTATTGGGAAAGCGCAGCTCGAATGATTGCGGACGTTTCAAAATCTGACAAAATTGTTGTGGAGAAATCTACAGTTCCAGTAAAAACAGCAGAGGCAATTGAGAAAATTCTCACACATAATACCAAGGGAATTAATTTCCAAATTCTCTCAAATCCAGAGTTTCTTGCTGAAGGAACTGCAATTCAAGACCTTCTAAACCCTGATCGTGTACTTATTGGAGGTCGGGAGACTCCAGAAGGACAAAAAGCAGTGGAAGCTTTGAAGGCAGTTTATGCCAACTGGGTTCCTGAAGATAGGATTATTGCTACAAATCTGTGGTCTGCAGAGCTTTCAAAGCTTGCCGCAAATGCAGTTTTGGCCCAGAGAATCTCATCAGTAAATGCAATGTCAGCTCTGTGTGAAGCAACTGGGGCAGATGTCACAGAAGTTGCTTATGCTGTTGGTAAGGATTCGAGAATTGGTCCAAAGTTCTTGAATGCTAGTGTTGGTTTTGGTGGGTCTTGTTTTCAGAAGGATATTCTGAACCTGATTTACATTTGTGAGTGCAATGGACTTATAGAAGTTGCAAACTACTGGAAAGGAGTCATTAAGATCAATGACTATCAGAAGTCAAGGTTTGTAAACCGTGTGGTTTCCTCGATGTTCAACACAGTATCAGGAAAGAAAATTGCAGTTCTAGGTTTTGCATTCAAGAAGGATACTGGTGATACTCGAGAAACTCCAGCCATTGATGTATGCAAGGGGCTTCTTGGAGACAAAGCGAATATCAGCATTTATGACCCACAAGTAACAGAGGATCAAATTCAGAGGGACCTCTCCATGAACAAATTTGATTGGGACCATCCTCCTCATTTGCAACCTATGAGCCCTTCTGCTATCAAGCAAGTCAGCGTGGTTTGGGATGCTTATGAAGCAACCAAAGATGCTCATGGAGTGTGCATTTTAACAGAGTGGGATGAGTTCAAGACTCTGGACTTTCAGAAAATTCATGACAATATGCAGAAACCTGCATTCATTTTTGATGGTCGGAACATTGTTGATGTGGAGAAGCTTAGGAAGATTGGTTTCATTGTTTACTCCATTGGTAAGCCTCTAGATCCGTGGGTGAAAGACCTCCCTGCATCAGCATAG___AAGATTGAAGTCCTTTTTGTCTCTTCATATTAGACAGTGGTTCTGCAAACTTTACTGTCAGAAGAGGCTTTCAGAAGATGGTGATTGAACTTGATTCTTAGAAACCATGGGAATGGGTTTCACTTTTCACGTTGCTTTGATTAGGTGGATGGTATTAGCTATCATTATTTCTAGAAGGATCTATTGTTTTTAGCACAGATGGAATCAATAACTTAGAAACTTTTTGTTTGAGTAGCATATCTTTTAGCAGAATCCTCTGCCATTGATTATCTGGAGTTCTATATAAAGGATCATTCAGATGGTATTGTTTTCCGGTCTGGTAAAATCCTATGGGGTTGTAGGGTTGTCTGGATTTTTGGAGATTTTAAACTCCTGATATTTTTTTTCTAGTCCTTTGATACCTAGTTGCATATGCCTACATTTTTGAAATTCTATGGGCATCTATGTGCGTTATATTCTAGAATTTGAAGGTTTTGCCCTGAAGTTTGGAGCTATATGGTAATCTGTGACGTGTTCCATTTTATCCAATGAATGCTCTGCCTGGAAATTTGGTGAATTGGTATTTCTATAAATGTGACTGGTTTTATCTTACTGATTCTTAGTAAAAGGATCAATTGTTCTAACCATAAAACATGGACTCTGCAAGGTGATGTTGATATTAATATATGCATTTGTGGAGATATCAGTGTTTTACTGTAGAAATATCTGCAAGAAGCATTGACAATGAAATGCATTTATTAGGAAATTTATCTTGTCAAATATCTCAGTTTTATTAAGTAGAACATTGCAGGCATGGTTCTCAAAT

Fln Alignment:

sp_v1.1_unigene15330___MVKICCLGAGYVGGPTMAIIALKCPAIEVVVVDISSARIAAWNSDQLPIYEPGLDEVVKGCRGKNLFFSSDVEKHVLEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNTKGINFQILSNPEFLAEGTAIQDLLNPDRVLIGGRETPEGQKAVEALKAVYANWVPEDRIIATNLWSAELSKLAANAVLAQRISSVNAMSALCEATGADVTEVAYAVGKDSRIGPKFLNASVGFGGSCFQKDILNLIYICECNGLIEVANYWKGVIKINDYQKSRFVNRVVSSMFNTVSGKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKANISIYDPQVTEDQIQRDLSMNKFDWDHPPHLQPMSPSAIKQVSVVWDAYEATKDAHGVCILTEWDEFKTLDFQKIHDNMQKPAFIFDGRNIVDVEKLRKIGFIVYSIGKPLDPWVKDLPASA
B8LQ50_______________MVKICCLGAGYVGGPTMAIIALKCPAIEVVVVDISSARIAAWNSDQLPIYEPGLDEVVKSCRGKNLFFSSDVEKHVLEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSRSDKIVVEKSTVPVKTAEAIEKILTHNTKGINFQILSNPEFLAEGTAIQDLLNPDRVLIGGRETPEGQKAVEALKAVYANWVPEDRIIATNLWSAELSKLAANAVLAQRISSVNAMSALCEATGADVTEVAYAVGKDSRIGPKFLNASVGFGGSCFQKDILNLIYICECNGLVEVANYWKGVIKINDYQKSRFVNRVVSSMFNTVSGKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKANISIYDPQVTEDQIQRDLSMNKFDWDHPPHLQPMSPSAIKQVSVVWDAYEATKDAHGVCILTEWDEFKTLDYQKIHDNMQKPAFIFDGRNIVDVEKLRKIGFIVYSIGKPLDSWVKDLPAAA

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
1988		96		3	0.999856

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain