SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15329

Length: 1453 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene15329

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Heat shock protein 70 (Fragment) n=2 Tax=core eudicotyledons RepID=Q7Y1W0_SAUME	-	-	86%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	91%
Blast2go	heat shock protein 70	-	-	97%

Source	ECs	Term	Type	e value	Identity
Blast2go	2-alkenal reductase.	EC:1.3.1.74	-	0.0	97%

Source	GOs	Term	Type	Identity
Blast2go	oxidation-reduction process	GO:0055114	Biological Process	97%
Blast2go	response to stress	GO:0006950	Biological Process	97%
Blast2go	auxin biosynthetic process	GO:0009851	Biological Process	97%
Blast2go	ATP binding	GO:0005524	Molecular Function	97%
Blast2go	2-alkenal reductase [NAD(P)] activity	GO:0032440	Molecular Function	97%

Source	InterPros	Term	Type	Identity
Blast2go	Heat shock protein Hsp70	IPR001023	-	97%
Blast2go	Heat shock protein 70	IPR013126	-	97%
Blast2go	Heat shock protein 70, conserved site	IPR018181	-	97%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LRY5

Fln msg: your sequence is shorter than subject: 409 - 652

Fln protein: RRDLADYKRKFKKDISGSARALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSIHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKRKVESKNSLENYAYNMRNTIKDEKIAAKVDPSDKKKIDDAIEQAIQWLDNNQLAEADEFDDKMKELESICNPIIAKMYQGAGGDVPGGGFGGVPPEGGPSSGGGAGPKIEEVD*

Protein Length: 410

Fln nts: CGTCGTGACTTGGCTGACTATAAAAGGAAGTTCAAGAAGGATATTAGTGGTAGTGCTAGGGCTTTGAGAAGATTGAGGACCGCTTGTGAAAGGGCCAAGAGGACTCTTTCATCCACTGCTCAGACAACCATAGAGATTGATTCTTTGTATGAAGGCATCGACTTTTATTCAACAATTACTAGAGCTAGGTTCGAAGAGTTGAATATGGATCTATTCAGAAAGTGTATGGAGCCTGTTGAAAAGTGTTTGAGAGATGCTAAGATGGATAAAAGCTCTATCCATGATGTTGTTTTGGTTGGTGGGTCTACTAGAATTCCCAAAGTGCAACAGTTGTTGCAGGACTTCTTCAATGGGAAAGAGCTCTGCAAGAGCATTAACCCCGATGAGGCTGTTGCCTATGGTGCTGCAGTGCAGGCCGCTATTCTAAGCGGAGAAGGCAATGAGAAGGTTCAAGACCTGTTACTTCTTGACGTAACTCCTCTCTCCCTTGGTCTGGAGACAGCAGGCGGTGTTATGACTGTTTTGATTCCTAGAAATACTACCATTCCTACAAAGAAAGAGCAGGTCTTCTCTACATACTCGGACAACCAGCCCGGTGTCCTCATTCAAGTGTATGAAGGTGAGAGAACACGAACAAGAGATAACAATTTGTTGGGCAAGTTTGAATTGTCTGGTATCCCACCTGCTCCCAGAGGTGTTCCTCAAATCACAGTGTGCTTTGACATTGATGCCAATGGTATCTTGAATGTTTCGGCTGAGGACAAGACCACTGGACAGAAGAACAAGATTACAATCACTAATGACAAGGGTAGGTTGAGCAAGGAAGAGATTGAGAAGATGGTTCAGGAAGCTGAGAAGTACAAGTCTGAGGACGAAGAGCATAAGAGGAAGGTTGAGTCCAAAAACTCGTTAGAGAACTATGCTTATAACATGAGGAACACGATCAAGGATGAGAAAATTGCTGCCAAGGTGGATCCATCCGACAAGAAGAAGATTGACGATGCAATCGAGCAGGCAATCCAATGGTTGGATAACAACCAGCTGGCGGAGGCTGATGAATTTGATGATAAAATGAAGGAACTTGAGAGCATCTGCAACCCGATAATTGCAAAGATGTATCAAGGTGCAGGTGGTGACGTGCCTGGAGGTGGCTTTGGTGGCGTTCCTCCTGAGGGTGGACCGTCCAGCGGTGGAGGTGCTGGCCCTAAGATTGAGGAAGTGGACTAA___TCTGGCTCTTTCTCAAATGCATATGATATTACTGTATTTTCTGTCGTAAGAATTATATTATTATTAGCATAATTAATGATGCAATTGCCGGCTATTATGGCGGCGATTTTATGTTAATCTTGAACCTCAATGCAAGAGATGGCCATTGCGGTGATTTCATACAATACTTATGGTGTTGGAATATTTATTTGATGTCGCAATCAAGGGCTGCTTTATGATGATTTTC

Fln Alignment:

sp_v1.1_unigene15329___DYKRKFKKDISGSARALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSIHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKRKVESKNSLENYAYNMRNTIKDEKIAAKVDPSDKKKIDDAIEQAIQWLDNNQLAEADEFDDKMKELESICNPIIAKMYQ
B8LRY5_______________EFKRKYKKDLSSSARALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTIHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQDAEKYKAEDEELKLKVEAKNSLENYAYNMRNTIRDDKIAGKLDPADKKKIEDAVDGIISWLDGNQLAEKEEFEDKLKELESTCNPIIAKMYQ

SNPs (tot: 4)

Position	A %	C %	G %	T %	Probability
742		12		87	0.992554
1380	14		85		0.993533
1390	50		25		0.995533
1391	50	25	25		0.995533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain