SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15231

Length: 1136 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene15231

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Acyl carrier protein n=1 Tax=Picea sitchensis RepID=A9NKH5_PICSI	-	-	88%
FL-Next	sp=Acyl carrier protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	88%
Blast2go	acyl carrier protein	-	-	76%

Source	GOs	Term	Type	Identity
Blast2go	fatty acid biosynthetic process	GO:0006633	Biological Process	76%
Blast2go	acyl carrier activity	GO:0000036	Molecular Function	76%
Blast2go	cofactor binding	GO:0048037	Molecular Function	76%
Blast2go	phosphopantetheine binding	GO:0031177	Molecular Function	76%
Blast2go	mitochondrion	GO:0005739	Cellular Component	76%

Full-Lengther Next Prediction

SNPs (tot: 13)

Position	A %	C %	G %	T %	Probability
526	85	14			0.993533
528		14	85		0.993533
529	14		85		0.993533
603	80	16			1.0
604	84		16		1.0
605	84			16	1.0
608			16	84	1.0
610		16	84		1.0
611	84	16			1.0
614		84	16		1.0
621	88	11			1.0
623	87	6			0.990219
624	5	94			0.998894

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain