SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15217

Length: 914 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene15217

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	UPF0057 domain containing protein	-	-	2.0e-21	57%
FL-Next	tr=Low temprature induced-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	81%
Blast2go	low temprature induced-like protein	-	-	1.24754e-22	89%

Source	GOs	Term	Type	e value	Identity
Blast2go	cytoplasmic membrane-bounded vesicle	GO:0016023	Cellular Component	1.24754e-22	89%
Blast2go	integral to membrane	GO:0016021	Cellular Component	1.24754e-22	89%

Full-Lengther Next Prediction

SNPs (tot: 53)

Position	A %	C %	G %	T %	Probability
73		23	76		1.0
85	92		7		0.999664
90	57	42			1.0
100		73	26		1.0
103		19		80	1.0
104		80	15		1.0
111		38		61	1.0
207		16		83	1.0
223		58		41	1.0
234		50		50	1.0
239	58		41		1.0
259		58	41		1.0
281	60			40	1.0
283	70		30		1.0
315		60		40	1.0
322			28	57	1.0
323	28	57	14		1.0
334	50			50	1.0
356	50		50		1.0
361	16		83		0.994512
367			50	50	1.0
368	50	16	33		1.0
373		66		33	1.0
381	83			16	0.994512
394		50		50	1.0
410		88	12		1.0
413	2	88	10		1.0
414	92	2		6	0.999991
438	14		85		1.0
457	88		11		1.0
462		64		35	1.0
476	6	93			0.99903
480	33		63		1.0
485		90	9		1.0
496	83		16		1.0
510			15	84	1.0
517	12	87			1.0
522		87		12	1.0
523		12		87	1.0
558	18			81	0.999994
569			80	20	0.995493
588		33	66		0.997452
731			10	90	0.90298
740		12	87		0.992554
781	85		14		0.993533
815	83	16			0.994512
828		83		16	0.994512
844			80	20	0.995493
845	20	80			0.995493
847	80	20			0.995493
848		20		80	0.995493
850			20	80	0.995493
852	33	33	33		0.997753

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain