SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15117

Length: 895 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene15117

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Major latex protein 22 n=3 Tax=Andropogoneae RepID=Q19VG6_MAIZE	-	-	1.0e-26	43%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	85%
Blast2go	bet v i allergen	-	-	0.0	72%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to biotic stimulus	GO:0009607	Biological Process	0.0	72%
Blast2go	defense response	GO:0006952	Biological Process	0.0	72%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Bet v I domain	IPR000916	-	0.0	72%
Blast2go	START-like domain	IPR023393	-	0.0	72%

Full-Lengther Next Prediction

SNPs (tot: 14)

Position	A %	C %	G %	T %	Probability
41	25			75	0.996473
43			25	75	0.996473
44			25	75	0.996473
710		44		55	1.0
714	66		33		0.997452
729		33		66	0.997452
732			66	33	0.997452
744		50		50	1.0
747		50	50		1.0
758		50		50	1.0
759	50	50			1.0
789		50	50		1.0
791		50		50	1.0
811		14		85	0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain