SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15111

Length: 883 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene15111

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein; K00419 ubiquinol-cytochrome c reductase subunit 9 [EC:1.10.2.2]	-	-	6.0e-20	68%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	95%
Blast2go	ubiquinol-cytochrome c reductase complex kda protein	-	-	3.07267e-31	85%

Source	ECs	Term	Type	e value	Identity
Blast2go	Ubiquinol--cytochrome-c reductase.	EC:1.10.2.2	-	3.07267e-31	85%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Oxidative phosphorylation	00190		3.07267e-31	85%
Blast2go	Metabolic pathways	01100		3.07267e-31	85%

Source	ECs	Term	Type	e value	Identity
AutoFact	Ubiquinol--cytochrome-c reductase.	EC:1.10.2.2	-	6.0e-20	68%

Source	KEGGs	Term	Type	e value	Identity
AutoFact	Oxidative phosphorylation	00190		6.0e-20	68%
AutoFact	Metabolic pathways	01100		6.0e-20	68%

Source	GOs	Term	Type	e value	Identity
Blast2go	transport	GO:0006810	Biological Process	3.07267e-31	85%
Blast2go	mitochondrial electron transport, ubiquinol to cytochrome c	GO:0006122	Biological Process	3.07267e-31	85%
Blast2go	ubiquinol-cytochrome-c reductase activity	GO:0008121	Molecular Function	3.07267e-31	85%
Blast2go	mitochondrial respiratory chain complex III	GO:0005750	Cellular Component	3.07267e-31	85%

Full-Lengther Next Prediction

SNPs (tot: 9)

Position	A %	C %	G %	T %	Probability
349		28		71	1.0
350	71	28			1.0
352			71	28	1.0
355	71	7			1.0
356	71	21		7	1.0
358	71		21	7	1.0
363	71	7		21	1.0
364	78	21			1.0
365	21			78	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain

Position	A %	C %	G %	T %	Probability
349		28		71	1.0
350	71	28			1.0
352			71	28	1.0
355	71	7			1.0
356	71	21		7	1.0
358	71		21	7	1.0
363	71	7		21	1.0
364	78	21			1.0
365	21			78	1.0

Position	A %	C %	G %	T %	Probability
349		28		71	1.0
350	71	28			1.0
352			71	28	1.0
355	71	7			1.0
356	71	21		7	1.0
358	71		21	7	1.0
363	71	7		21	1.0
364	78	21			1.0
365	21			78	1.0

Position	A %	C %	G %	T %	Probability
349		28		71	1.0
350	71	28			1.0
352			71	28	1.0
355	71	7			1.0
356	71	21		7	1.0
358	71		21	7	1.0
363	71	7		21	1.0
364	78	21			1.0
365	21			78	1.0