SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15110

Length: 899 nt

Origin of reads: Uagpf Uma

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene15110 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Pathogenesis-related protein 10-3.3-like (Fragment) n=6 Tax=Picea RepID=Q3I3X5_PICAB	-	-	91%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	93%
Blast2go	pathogenesis-related protein 10- -like	-	-	89%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to biotic stimulus	GO:0009607	Biological Process	0.0	89%
Blast2go	defense response	GO:0006952	Biological Process	0.0	89%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Bet v I domain	IPR000916	-	0.0	89%
Blast2go	START-like domain	IPR023393	-	0.0	89%

Full-Lengther Next Prediction

SNPs (tot: 7)

Position	A %	C %	G %	T %	Probability
834	13		83	2	1.0
864	4	14		80	1.0
866		6	20	73	1.0
867	20	30	50		1.0
871	33	50		16	1.0
872		80	20		0.995493
873	20	20		60	0.99255

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain