SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15086

Length: 1818 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene15086

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Enolase n=3 Tax=Picea sitchensis RepID=B8LL07_PICSI	-	-	98%
FL-Next	sp=Enolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	98%
Blast2go	enolase	-	-	92%

Source	ECs	Term	Type	e value	Identity
Blast2go	Phosphopyruvate hydratase.	EC:4.2.1.11	-	0.0	92%

Source	KEGGs	Term	Identity
Blast2go	Glycolysis / Gluconeogenesis	00010	92%
Blast2go	Methane metabolism	00680	92%
Blast2go	Biosynthesis of phenylpropanoids	01061	92%
Blast2go	Biosynthesis of terpenoids and steroids	01062	92%
Blast2go	Biosynthesis of alkaloids derived from shikimate pathway	01063	92%
Blast2go	Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid	01064	92%
Blast2go	Biosynthesis of alkaloids derived from histidine and purine	01065	92%
Blast2go	Biosynthesis of alkaloids derived from terpenoid and polyketide	01066	92%
Blast2go	Biosynthesis of plant hormones	01070	92%
Blast2go	Metabolic pathways	01100	92%
Blast2go	Biosynthesis of secondary metabolites	01110	92%

Source	GOs	Term	Type	Identity
Blast2go	glycolysis	GO:0006096	Biological Process	92%
Blast2go	phosphopyruvate hydratase activity	GO:0004634	Molecular Function	92%
Blast2go	magnesium ion binding	GO:0000287	Molecular Function	92%
Blast2go	cell surface	GO:0009986	Cellular Component	92%
Blast2go	phosphopyruvate hydratase complex	GO:0000015	Cellular Component	92%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LL07

Fln msg:

Fln protein: MATITLVKARSIFDSRGNPTVEVDIHLSDGYLSRAAVPSGASTGVYEALELRDSGKNYMGKGVSKAVENVNKIIGPALIGKDPVDQTGIDNFMVQELDGTQNQWGWCKQKLGANAILAVSLAVCKAGAYVKKIPLYQHIANIAGNKTLVMPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFREAMQMGSEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLKIAIEKAGYTGKVVIGMDVAASEFYTEKDQKYDLNFKEENNNGSQKISGSELIKLYESFIEDYPIVSIEDPFDQDDWAHYAQFTATIGEKVQIVGDDLLVTNPKRVGKAINEKSCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMTSHRSGETEDTFIADLAVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGSAAVYAGASFRKPVEPY*

Protein Length: 447

Fln nts: CGTCGTGACCTTGATTGGGGAACGAGGTGTAATTTTCAGTTCAGAAAAACCAATTAGTCTTTGGATATCATCAAGTTAAATCTTCAGAGATC_-_ATGGCAACCATCACATTAGTGAAAGCCAGATCGATTTTTGACAGCCGTGGAAATCCCACTGTCGAGGTCGATATTCATCTTTCTGATGGTTATCTTTCCAGAGCTGCTGTTCCAAGTGGTGCTTCCACTGGTGTGTATGAAGCACTGGAGCTTCGTGATaGcGGGAAGAACTACATGGGAAAGGGTGTTTCAAAGGCTGTTGAAAATGTAAACAAAATTATCGGACCAGCTCTTATTGGCAAGGATCCAGTAGATCAGACTGGAATCGATAACTTCATGGTACAGGAGCTTGATGGAACTCAAAATCAATGGGGCTGGTGCAAACAAAAGCTTGGAGCAAATGCTATATTAGCTGTATCTCTGGCTGTTTGTAAAGCAGGGGCTTATGTTAAGAAGATACCTCTTTATCAGCATATTGCAAACATTGCTGGTAACAAAACTTTGGTGATGCCAGTACCTGCTTTCAATGTCATCAACGGAGGTTCACATGCAGGAAATAAACTGGCAATGCAGGAGTTTATGATTCTACCCGTTGGAGCTTCTTCATTTAGAGAGGCCATGCAGATGGGTTCAGAAGTTTACCACCATCTGAAGGCTGTAATTAAAAAAAAGTATGGTCAAGATGCAACAAATGTTGGAGACGAAGGAGGCTTTGCTCCAAATATTCAGGAGAATAAAGAAGGCCTTGAGTTATTGAAGATTGCCATTGAGAAAGCAGGCTATACTGGCAAGGTTGTTATTGGCATGGATGTAGCTGCTTCCGAGTTTTACACTGAGAAGGATCAGAAGTATGATTTGAACTTCAAGGAGGAGAATAATAATGGTAGCCAGAAGATATCAGGATCTGAGCTGATCAAGCTCTATGAATCGTTTATTGAGGATTATCCAATCGTATCTATAGAAGACCCATTTGATCAAGATGATTGGGCTCACTATGCACAATTTACGGCCACAATTGGGGAGAAGGTGCAAATTGTGGGGGATGATCTATTAGTGACAAATCCAAAGCGTGTTGGAAAGGCAATCAATGAAAAATCTTGCAATGCTCTTTTACTGAAGGTGAACCAAATTGGTTCTGTTACGGAAAGTATTGAAGCAGTAAAAATGTCTAAACGTGCTGGATGGGGAGTGATGACAAGCCATCGCAGTGGTGAAACAGAAGACACCTTTATTGCAGATTTGGCAGTGGGCTTGGCCACGGGCCAAATCAAGACAGGTGCTCCTTGTAGGTCTGAGCGACTTGCTAAGTATAATCAGCTTTTACGAATTGAGGAGGAACTGGGGTCGGCAGCAGTGTATGCAGGTGCAAGTTTCCGCAAGCCCGTGGAGCCGTACTAA___AGAGAAATGTTTTCTCATTTTCGAGAATGTTTTTTTGATGTTTAGGATTGTGAGGAAATAAATATGTTTTGGCATCTTCGAGAATGTTTTACTCGATTTTGCTCGGTGAGATCCTTCTAACGGGGATAAATTATATTCTGTATTTTCCCCCCGGTTTCTTTATATGCAAGGGCAGGGGAAAATTTTGGATGCTGAAAATTCCTGTGAAATAAAAAGTAGTATATTTTTTGGCCTAGTATGCTTATTGCAGTGGCACTTTTTCTTGGTAATTTTTGGGGTTGTCCAGATTACATACCAGAGCAGATTGTTATTCTCTGCAAAATGTTTTTGTGAACATTTATAATGAGGGTGCTAGAATGATCAATCAATTAGACTTTTTTGATGCGTC

Fln Alignment:

sp_v1.1_unigene15086___MATITLVKARSIFDSRGNPTVEVDIHLSDGYLSRAAVPSGASTGVYEALELRDSGKNYMGKGVSKAVENVNKIIGPALIGKDPVDQTGIDNFMVQELDGTQNQWGWCKQKLGANAILAVSLAVCKAGAYVKKIPLYQHIANIAGNKTLVMPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFREAMQMGSEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLKIAIEKAGYTGKVVIGMDVAASEFYTEKDQKYDLNFKEENNNGSQKISGSELIKLYESFIEDYPIVSIEDPFDQDDWAHYAQFTATIGEKVQIVGDDLLVTNPKRVGKAINEKSCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMTSHRSGETEDTFIADLAVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGSAAVYAGASFRKPVEPY
B8LL07_______________MATIKAVKARSIFDSRGNPTVEVDIHLSDGYLSRAAVPSGASTGVYEALELRDGGKDYMGKGVSKAVGNVNKIIGPALIGKDPVDQTGIDNFMVQELDGTQNQWGWCKQKLGANAILAVSLAVCKAGAYVKKIPLYQHIANIAGNKTLVMPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFREAMQMGSEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLKIAIEKAGYTGKVVIGMDVAASEFYTEKDQKYDLNFKEENNNGSQKISGSELIKLYESFIEDYPIVSIEDPFDQDDWAHYAQFTATIGEKVQIVGDDLLVTNPKRVGKAINEKSCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMTSHRSGETEDTFIADLAVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGSAAVYAGASFRQPVEPY

SNPs (tot: 9)

Position	A %	C %	G %	T %	Probability
928		11		88	0.923564
929	88		11		0.923564
932	88		11		0.923564
933			88	11	0.923564
936		11		88	0.923564
1602	10		90		0.90298
1664		14		85	0.993533
1678		80		20	0.995493
1725		57	42		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain