SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15067

Length: 1036 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene15067

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Peptide methionine sulfoxide reductase B2, chloroplastic n=2 Tax=Arabidopsis RepID=MSRB2_ARATH	-	-	86%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	78%
Blast2go	methionine sulfoxide reductase domain-containing protein	-	-	87%

Source	ECs	Term	Type	e value	Identity
Blast2go	Peptide-methionine (S)-S-oxide reductase.	EC:1.8.4.11	-	0.0	87%

Source	GOs	Term	Type	Identity
Blast2go	oxidation-reduction process	GO:0055114	Biological Process	87%
Blast2go	peptide-methionine-(S)-S-oxide reductase activity	GO:0008113	Molecular Function	87%
Blast2go	chloroplast	GO:0009507	Cellular Component	87%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Methionine sulphoxide reductase B	IPR002579	-	0.0	87%
Blast2go	Mss4-like	IPR011057	-	0.0	87%

Full-Lengther Next Prediction

SNPs (tot: 8)

Position	A %	C %	G %	T %	Probability
264	88		11		0.923564
282			90	10	0.90298
991	88			11	1.0
1009	10	90			0.90298
1011	22			77	0.999999
1012	22			77	0.999999
1013	25		75		1.0
1015	14			85	0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain