SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15063

Length: 854 nt

Origin of reads: Biogeco_1 Biogeco_2 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene15063

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Gibberellin regulated protein [Medicago truncatula]	-	-	2.0e-34	72%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	66%
Blast2go	gibberellin induced protein	-	-	1.49344e-35	82%

Source	GOs	Term	Type	e value	Identity
Blast2go	extracellular region	GO:0005576	Cellular Component	1.49344e-35	82%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Gibberellin regulated protein	IPR003854	-	1.49344e-35	82%

Full-Lengther Next Prediction

SNPs (tot: 9)

Position	A %	C %	G %	T %	Probability
249		20		80	0.995493
281	80		20		0.995493
574		2		91	0.999996
588	1	77		20	1.0
684		96		3	0.984346
699	4		95		0.994598
704			12	87	0.999964
705	12			87	0.999964
708		25		75	1.0

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain