SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15055

Length: 949 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene15055

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	EF hand family protein n=1 Tax=Zea mays RepID=B6U4W9_MAIZE	-	-	4.00001e-40	54%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	74%
Blast2go	calcium binding protein	-	-	0.0	69%

Source	GOs	Term	Type	e value	Identity
Blast2go	calcium ion binding	GO:0005509	Molecular Function	0.0	69%

Source	InterPros	Term	Type	Identity
Blast2go	Calcium-binding EF-hand	IPR002048	-	69%
Blast2go	EF-hand-like domain	IPR011992	-	69%
Blast2go	EF-Hand 1, calcium-binding site	IPR018247	-	69%
Blast2go	EF-hand	IPR018248	-	69%
Blast2go	EF-HAND 2	IPR018249	-	69%

Full-Lengther Next Prediction

SNPs (tot: 7)

Position	A %	C %	G %	T %	Probability
615	90		6	3	0.997952
617			93	6	0.999364
622	6	3		90	0.997952
623		6	90	3	0.998304
625		6	93		0.999453
626	6		93		0.999453
890			14	85	0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain