SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene14949

Length: 1049 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene14949

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	50S ribosomal protein CL25, chloroplast precursor, putative	-	-	2.0e-07	47%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	85%
Blast2go	unknown [Picea sitchensis]	-	-	2.82147e-40	90%

Source	ECs	Term	Type	e value	Identity
Blast2go	Protein-synthesizing GTPase.	EC:3.6.5.3	-	2.82147e-40	90%

Source	GOs	Term	Type	e value	Identity
Blast2go	translation	GO:0006412	Biological Process	2.82147e-40	90%
Blast2go	structural constituent of ribosome	GO:0003735	Molecular Function	2.82147e-40	90%
Blast2go	rRNA binding	GO:0019843	Molecular Function	2.82147e-40	90%
Blast2go	ribosome	GO:0005840	Cellular Component	2.82147e-40	90%
Blast2go	chloroplast	GO:0009507	Cellular Component	2.82147e-40	90%

Full-Lengther Next Prediction

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
484		16		83	0.994512
596	83		16		0.999991

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain