SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
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ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene14945

Length: 925 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene14945

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	nucleic acid binding	-	-	3.0e-39	71%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	94%
Blast2go	protein	-	-	0.0	89%

Source	GOs	Term	Type	Identity
Blast2go	nucleic acid binding	GO:0003676	Molecular Function	89%
Blast2go	nucleus	GO:0005634	Cellular Component	89%
Blast2go	plasma membrane	GO:0005886	Cellular Component	89%

Full-Lengther Next Prediction

SNPs (tot: 22)

Position	A %	C %	G %	T %	Probability
336		9	90		1.0
339			9	90	1.0
341	90		9		1.0
342	9		90		1.0
343		9	90		1.0
344	90	9			1.0
345	90			9	1.0
351	90		9		1.0
353		9		90	1.0
354	9		90		1.0
356			90	9	1.0
357	90	9			1.0
358	9	90			1.0
545			88	11	0.999952
694	87			12	1.0
698	86		13		1.0
817	14		85		0.999981
877	75		25		1.0
878	42			57	1.0
883		20		80	0.995493
884	25		75		0.996473
891		33		66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain